PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6WJL

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
F	heavy	Homo.sapiens	Hu_IGHV3-11*01	93.2	Hu_IGHV3-11*01	100.0	H1	13	H1-13-1	14	AASGFTFSDYYMS	BBBLBBAAABBBB
F	heavy	Homo.sapiens	Hu_IGHV3-11*01	93.2	Hu_IGHV3-11*01	100.0	H2	10	H2-10-2	10	YISSSGSTIY	BBBAALABBB
F	heavy	Homo.sapiens	Hu_IGHV3-11*01	93.2	Hu_IGHV3-11*01	100.0	H3	12	H3-12-*	-1	ARESGYDYVFDY	BBBAEBBLBBAB
F	heavy	Homo.sapiens	Hu_IGHV3-11*01	93.2	Hu_IGHV3-11*01	75.0	H4	8	H4-8-1	16	RDNSKNTL	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-11*01	93.2	Hu_IGHV3-11*01	100.0	H1	13	H1-13-1	15	AASGFTFSDYYMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-11*01	93.2	Hu_IGHV3-11*01	100.0	H2	10	H2-10-2	10	YISSSGSTIY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-11*01	93.2	Hu_IGHV3-11*01	100.0	H3	12	H3-12-*	-1	ARESGYDYVFDY	BBBALBBLBBAB
H	heavy	Homo.sapiens	Hu_IGHV3-11*01	93.2	Hu_IGHV3-11*01	75.0	H4	8	H4-8-1	15	RDNSKNTL	BBAAALBB
J	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.7	Hu_IGKV1-9*01	81.8	L1	11	L1-11-*	-1	RASQSISSWLA	BBABBBAABBB
J	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.7	Hu_IGKV1-9*01	100.0	L2	8	L2-8-1	11	YAASTLQS	BLEABBBB
J	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.7	Hu_IGKV1-9*01	100.0	L3	9	L3-9-2	21	QQLNSYPIT	BBAABABBB
J	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.7	Hu_IGKV1-9*01	100.0	L4	6	L4-6-1	16	GSGTEF	EBEABB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.7	Hu_IGKV1-9*01	81.8	L1	11	L1-11-*	-1	RASQSISSWLA	BBABBBAABBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.7	Hu_IGKV1-9*01	100.0	L2	8	L2-8-1	12	YAASTLQS	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.7	Hu_IGKV1-9*01	100.0	L3	9	L3-9-2	18	QQLNSYPIT	BBAABABBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.7	Hu_IGKV1-9*01	100.0	L4	6	L4-6-2	19	GSGTEF	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024