PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6VI0

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	78.8	CDRLenMismatch	-1.0	L1	9	L1-9-*	-1	RTSQYGSLA
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	78.8	Hu_IGKV3-20*01	50.0	L2	8	L2-8-1	15	YSGSTRAA	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	78.8	Hu_IGKV3-20*01	0.0	L3	5	L3-5-*	-1	QQYEF	BBBLB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	78.8	Hu_IGKV3-20*01	33.3	L4	6	L4-6-2	20	RWGPDY	BBEABB
E	heavy	Homo.sapiens	Hu_IGHV1-18*01	61.2	None	-1.0	H1	13	H1-13-1	25	RASGYEFIDCTLN	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV1-18*01	61.2	None	-1.0	H2	10	H2-10-6	21	WLKPRWGAVN	BBBABLLBBB
E	heavy	Homo.sapiens	Hu_IGHV1-18*01	61.2	Hu_IGHV1-18*01	50.0	H3	14	H3-14-*	-1	TRGKNCDYNWDFEH	BBBABBABAABBAB
E	heavy	Homo.sapiens	Hu_IGHV1-18*01	61.2	Hu_IGHV1-18*01	0.0	H4	15	H4-15-*	-1	RQLSQDpddpdwgTA
H	heavy	Homo.sapiens	Hu_IGHV1-18*01	61.2	None	-1.0	H1	13	H1-13-1	25	RASGYEFIDCTLN	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-18*01	61.2	None	-1.0	H2	10	H2-10-6	21	WLKPRWGAVN	BBBABLLBBB
H	heavy	Homo.sapiens	Hu_IGHV1-18*01	61.2	Hu_IGHV1-18*01	50.0	H3	14	H3-14-*	-1	TRGKNCDYNWDFEH	BBBABBABAABBAB
H	heavy	Homo.sapiens	Hu_IGHV1-18*01	61.2	Hu_IGHV1-18*01	0.0	H4	15	H4-15-*	-1	RQLSQDpddpdwgTA
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	78.8	CDRLenMismatch	-1.0	L1	9	L1-9-*	-1	RTSQYGSLA
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	78.8	Hu_IGKV3-20*01	50.0	L2	8	L2-8-1	15	YSGSTRAA	BLLABBBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	78.8	Hu_IGKV3-20*01	0.0	L3	5	L3-5-*	-1	QQYEF	BBBLB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	78.8	Hu_IGKV3-20*01	33.3	L4	6	L4-6-2	20	RWGPDY	BBEABB
K	heavy	Homo.sapiens	Hu_IGHV1-18*01	61.2	None	-1.0	H1	13	H1-13-1	25	RASGYEFIDCTLN	BBBLBBAAABBBB
K	heavy	Homo.sapiens	Hu_IGHV1-18*01	61.2	None	-1.0	H2	10	H2-10-6	21	WLKPRWGAVN	BBBABLLBBB
K	heavy	Homo.sapiens	Hu_IGHV1-18*01	61.2	Hu_IGHV1-18*01	50.0	H3	14	H3-14-*	-1	TRGKNCDYNWDFEH	BBBABBABAABBAB
K	heavy	Homo.sapiens	Hu_IGHV1-18*01	61.2	Hu_IGHV1-18*01	0.0	H4	15	H4-15-*	-1	RQLSQDpddpdwgTA
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	78.8	CDRLenMismatch	-1.0	L1	9	L1-9-*	-1	RTSQYGSLA
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	78.8	Hu_IGKV3-20*01	50.0	L2	8	L2-8-1	15	YSGSTRAA	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	78.8	Hu_IGKV3-20*01	0.0	L3	5	L3-5-*	-1	QQYEF	BBBLB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	78.8	Hu_IGKV3-20*01	33.3	L4	6	L4-6-2	20	RWGPDY	BBEABB

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