PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6UMG

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-30*03	95.9	Hu_IGHV3-30*03	92.3	H1	13	H1-13-1	7	AASGFTFSSFGMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*03	95.9	Hu_IGHV3-30*03	80.0	H2	10	H2-10-2	7	VISFDGSIKY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*03	95.9	Hu_IGHV3-30*03	100.0	H3	23	H3-23-*	-1	ARDRlnyydssgyYHYKYYGMAV
H	heavy	Homo.sapiens	Hu_IGHV3-30*03	95.9	Hu_IGHV3-30*03	100.0	H4	8	H4-8-1	10	RDNSKNTL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV1-51*01	98.5	Hu_IGLV1-51*01	100.0	L1	13	L1-13-1	11	SGSSSNIGNNYVS	BBBAAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-51*01	98.5	Hu_IGLV1-51*01	100.0	L2	8	L2-8-1	9	YDNNKRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-51*01	98.5	Hu_IGLV1-51*01	88.9	L3	11	L3-11-1	8	GTWDSRLSAVV	BBBBAAALBBB
L	lambda	Homo.sapiens	Hu_IGLV1-51*01	98.5	Hu_IGLV1-51*01	83.3	L4	6	L4-6-2	13	KSGTST	BBEABB
h	heavy	Homo.sapiens	Hu_IGHV3-30*03	95.9	Hu_IGHV3-30*03	92.3	H1	13	H1-13-1	6	AASGFTFSSFGMH	BBBLBBAAABBBB
h	heavy	Homo.sapiens	Hu_IGHV3-30*03	95.9	Hu_IGHV3-30*03	80.0	H2	10	H2-10-2	7	VISFDGSIKY	BBBAALABBB
h	heavy	Homo.sapiens	Hu_IGHV3-30*03	95.9	Hu_IGHV3-30*03	100.0	H3	23	H3-23-*	-1	ARDRlnyydssgyYHYKYYGMAV
h	heavy	Homo.sapiens	Hu_IGHV3-30*03	95.9	Hu_IGHV3-30*03	100.0	H4	8	H4-8-1	10	RDNSKNTL	BBAAALBB
l	lambda	Homo.sapiens	Hu_IGLV1-51*01	98.5	Hu_IGLV1-51*01	100.0	L1	13	L1-13-1	11	SGSSSNIGNNYVS	BBBAAAAAABBBB
l	lambda	Homo.sapiens	Hu_IGLV1-51*01	98.5	Hu_IGLV1-51*01	100.0	L2	8	L2-8-1	9	YDNNKRPS	BLEABBBB
l	lambda	Homo.sapiens	Hu_IGLV1-51*01	98.5	Hu_IGLV1-51*01	88.9	L3	11	L3-11-1	9	GTWDSRLSAVV	BBBBAAALBBB
l	lambda	Homo.sapiens	Hu_IGLV1-51*01	98.5	Hu_IGLV1-51*01	83.3	L4	6	L4-6-2	13	KSGTST	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024