PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6UKT

#CDRs = 4; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Lama.glama	La_IGHV1S3*01_VHH	87.7	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-*	-1	AASGIIFRSNGMA	BBBLBBBBLBBBB
C	heavy	Lama.glama	La_IGHV1S3*01_VHH	87.7	La_IGHV1S3*01_VHH	44.4	H2	9	H2-9-*	-1	SITSFGDAI	BBBABBBBB
C	heavy	Lama.glama	La_IGHV1S3*01_VHH	87.7	La_IGHV1S3*01_VHH	50.0	H3	8	H3-8-*	-1	NTYPVNSA	BBAABBBB
C	heavy	Lama.glama	La_IGHV1S3*01_VHH	87.7	La_IGHV1S3*01_VHH	75.0	H4	8	H4-8-*	-1	RDNARNAV	ALBLBABB
D	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	53.8	H1	13	H1-13-*	-1	AASGLIVSNYAMG	BAAALBBBABBBB
D	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	CDRLenMismatch	-1.0	H2	10	H2-10-4	21	YINWNGGVTY	BBBBLLABBB
D	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	0.0	H3	17	H3-17-*	-1	ARTSRASvttRVADFGY
D	heavy	Lama.glama	La_IGHV1S3*01_VHH	90.4	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	17	RDNAKNTV	BBAAALBB
E	heavy	Lama.glama	La_IGHV1S3*01_VHH	91.8	La_IGHV1S3*01_VHH	61.5	H1	13	H1-13-*	-1	AASGGIVHISSMG	BBAALBBLALBBB
E	heavy	Lama.glama	La_IGHV1S3*01_VHH	91.8	La_IGHV1S3*01_VHH	22.2	H2	9	H2-9-*	-1	TSPSNGDIR	BBALAEBBB
E	heavy	Lama.glama	La_IGHV1S3*01_VHH	91.8	La_IGHV1S3*01_VHH	0.0	H3	15	H3-15-*	-1	HSFlrhtasaSYNNY
E	heavy	Lama.glama	La_IGHV1S3*01_VHH	91.8	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-*	-1	Rdnakntv
F	heavy	Lama.glama	La_IGHV1S2*01_VHH	91.8	La_IGHV1S2*01_VHH	38.5	H1	13	H1-13-*	-1	AASVRTSDTDGMA	BBAABBBAABBBB
F	heavy	Lama.glama	La_IGHV1S2*01_VHH	91.8	CDRLenMismatch	-1.0	H2	9	H2-9-*	-1	GIRWNSATW	ABBAAABBB
F	heavy	Lama.glama	La_IGHV1S2*01_VHH	91.8	La_IGHV1S2*01_VHH	50.0	H3	18	H3-18-*	-1	ARRAYgfdtDSRESAYSN
F	heavy	Lama.glama	La_IGHV1S2*01_VHH	91.8	La_IGHV1S2*01_VHH	100.0	H4	8	H4-8-1	16	RDNAKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024