PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6U6M

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	82.2	CDRLenMismatch	-1.0	H1	14	H1-14-*	-1	AVSGTSINSaYAWG	BBBLBBAAABABBB
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	82.2	Ma_IGHV4-2*01	30.0	H2	10	H2-10-1	15	TVYTSTGNTY	BBBAAALBBB
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	82.2	Ma_IGHV4-2*01	100.0	H3	15	H3-15-*	-1	ARADGSDSGWpHFDN
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	82.2	Ma_IGHV4-2*01	87.5	H4	8	H4-8-1	13	KDTSKNQF	BBAAALBB
L	kappa	Macaca.mulatta	Ma_IGKV3S6*01	88.4	Ma_IGKV3S6*01	72.7	L1	11	L1-11-1	7	RASQSVRNRIA	BBABBAEABBB
L	kappa	Macaca.mulatta	Ma_IGKV3S6*01	88.4	Ma_IGKV3S6*01	75.0	L2	8	L2-8-1	3	YDASIRAP	BLLABBBB
L	kappa	Macaca.mulatta	Ma_IGKV3S6*01	88.4	Ma_IGKV3S6*01	57.1	L3	8	L3-8-*	-1	QLEANWLT	BBBBABBB
L	kappa	Macaca.mulatta	Ma_IGKV3S6*01	88.4	Ma_IGKV3S6*01	100.0	L4	6	L4-6-1	15	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024