PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6QX4

#CDRs = 4; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Lama.glama	La_IGHV1S3*01_VHH	95.9	La_IGHV1S3*01_VHH	53.8	H1	13	H1-13-*	-1	AASGSIFRINDMG	BBBEBBABBBBBB
C	heavy	Lama.glama	La_IGHV1S3*01_VHH	95.9	La_IGHV1S3*01_VHH	100.0	H2	9	H2-9-1	16	AITSGGSTN	BBBAALBBB
C	heavy	Lama.glama	La_IGHV1S3*01_VHH	95.9	La_IGHV1S3*01_VHH	50.0	H3	13	H3-13-*	-1	HADFSTGWAPYDY	BBBABALEBBBBB
C	heavy	Lama.glama	La_IGHV1S3*01_VHH	95.9	La_IGHV1S3*01_VHH	75.0	H4	8	H4-8-1	4	RDNAKKMV	BBAAALBB
D	heavy	Lama.glama	La_IGHV1S6*01	95.9	La_IGHV1S6*01	84.6	H1	13	H1-13-1	18	AASGFTFSSYPMS	BBBLBBAAABBBB
D	heavy	Lama.glama	La_IGHV1S6*01	95.9	CDRLenMismatch	-1.0	H2	9	H2-9-1	9	DINSSGTTY	BBBAALBBB
D	heavy	Lama.glama	La_IGHV1S6*01	95.9	La_IGHV1S6*01	50.0	H3	18	H3-18-*	-1	ATEGKYGRTWYgqleYHY
D	heavy	Lama.glama	La_IGHV1S6*01	95.9	La_IGHV1S6*01	87.5	H4	8	H4-8-1	12	RDNAKNTL	BBAAALBB
E	heavy	Lama.glama	La_IGHV1S3*01_VHH	95.9	La_IGHV1S3*01_VHH	53.8	H1	13	H1-13-*	-1	AASGSIFRINDMG	BBBEBBABBBBBB
E	heavy	Lama.glama	La_IGHV1S3*01_VHH	95.9	La_IGHV1S3*01_VHH	100.0	H2	9	H2-9-1	15	AITSGGSTN	BBBAALBBB
E	heavy	Lama.glama	La_IGHV1S3*01_VHH	95.9	La_IGHV1S3*01_VHH	50.0	H3	13	H3-13-*	-1	HADFSTGWAPYDY	BBBABABEBBBBB
E	heavy	Lama.glama	La_IGHV1S3*01_VHH	95.9	La_IGHV1S3*01_VHH	75.0	H4	8	H4-8-1	7	RDNAKKMV	BBAAALBB
H	heavy	Lama.glama	La_IGHV1S6*01	95.9	La_IGHV1S6*01	84.6	H1	13	H1-13-1	15	AASGFTFSSYPMS	BBBLBBAAABBBB
H	heavy	Lama.glama	La_IGHV1S6*01	95.9	CDRLenMismatch	-1.0	H2	9	H2-9-1	13	DINSSGTTY	BBBAALBBB
H	heavy	Lama.glama	La_IGHV1S6*01	95.9	La_IGHV1S6*01	50.0	H3	18	H3-18-*	-1	ATEGKYGRTWYgqleYHY
H	heavy	Lama.glama	La_IGHV1S6*01	95.9	La_IGHV1S6*01	87.5	H4	8	H4-8-1	12	RDNAKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024