PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6P9I

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-69*15	87.7	Hu_IGHV1-69*15	61.5	H1	13	H1-13-1	14	KVSGGNLRSYGIS	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*15	87.7	Hu_IGHV1-69*15	70.0	H2	10	H2-10-*	-1	VIIPIFGTPT	BBBAAAEBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*15	87.7	Hu_IGHV1-69*15	100.0	H3	20	H3-20-*	-1	ARDWpsitvaVDATNYGMDV
A	heavy	Homo.sapiens	Hu_IGHV1-69*15	87.7	Hu_IGHV1-69*15	37.5	H4	8	H4-8-1	8	ADDSNNIV	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV2-11*01	95.6	Hu_IGLV2-11*01	71.4	L1	14	L1-14-2	10	TGTSNDVGYYdHVS	BBBAAAAAABABBB
B	lambda	Homo.sapiens	Hu_IGLV2-11*01	95.6	Hu_IGLV2-11*01	100.0	L2	8	L2-8-1	9	YDVSKRPS	BLEABBBB
B	lambda	Homo.sapiens	Hu_IGLV2-11*01	95.6	Hu_IGLV2-11*01	77.8	L3	10	L3-10-2	7	CSFAGSYTYV	BBBAELLBBB
B	lambda	Homo.sapiens	Hu_IGLV2-11*01	95.6	Hu_IGLV2-11*01	83.3	L4	6	L4-6-2	10	KSDNTA	BBEABB
C	heavy	Homo.sapiens	Hu_IGHV1-69*15	87.7	Hu_IGHV1-69*15	61.5	H1	13	H1-13-1	17	KVSGGNLRSYGIS	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*15	87.7	Hu_IGHV1-69*15	70.0	H2	10	H2-10-*	-1	VIIPIFGTPT	BBBAAAEBBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*15	87.7	Hu_IGHV1-69*15	100.0	H3	20	H3-20-*	-1	ARDWpsitvaVDATNYGMDV
C	heavy	Homo.sapiens	Hu_IGHV1-69*15	87.7	Hu_IGHV1-69*15	37.5	H4	8	H4-8-1	8	ADDSNNIV	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV2-11*01	95.6	Hu_IGLV2-11*01	71.4	L1	14	L1-14-2	9	TGTSNDVGYYdHVS	BBBAAAAAABABBB
D	lambda	Homo.sapiens	Hu_IGLV2-11*01	95.6	Hu_IGLV2-11*01	100.0	L2	8	L2-8-1	13	YDVSKRPS	BLEABBBB
D	lambda	Homo.sapiens	Hu_IGLV2-11*01	95.6	Hu_IGLV2-11*01	77.8	L3	10	L3-10-2	11	CSFAGSYTYV	BBBAELLBBB
D	lambda	Homo.sapiens	Hu_IGLV2-11*01	95.6	Hu_IGLV2-11*01	83.3	L4	6	L4-6-2	5	KSDNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024