PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6O25

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	84.6	H1	13	H1-13-1	8	EASGFTFSSYGIH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H2	10	H2-10-2	12	VIWYDGSNKY	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H3	14	H3-14-*	-1	ARAGYSNYGHYFDY	BBBBBBABEBBBAB
A	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L1	12	L1-12-2	6	RASQSVSsSYLA	BBABBBBLLBBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	11	YGASSRAT	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L3	9	L3-9-2	16	QQYGSSPPT	BBBABABBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
E	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	84.6	H1	13	H1-13-1	8	EASGFTFSSYGIH	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H2	10	H2-10-2	11	VIWYDGSNKY	BBBAALABBB
E	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H3	14	H3-14-*	-1	ARAGYSNYGHYFDY	BBBBBBABEBBBAB
E	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	9	RDNSKNTL	BBAAALBB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L1	12	L1-12-2	6	RASQSVSsSYLA	BBABBBBLLBBB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	11	YGASSRAT	BLLABBBB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L3	9	L3-9-2	16	QQYGSSPPT	BBBABABBB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
I	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	84.6	H1	13	H1-13-1	8	EASGFTFSSYGIH	BBBLBBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H2	10	H2-10-2	11	VIWYDGSNKY	BBBAALABBB
I	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H3	14	H3-14-*	-1	ARAGYSNYGHYFDY	BBBBBBABEBBBAB
I	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L1	12	L1-12-2	6	RASQSVSsSYLA	BBABBBBLLBBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	11	YGASSRAT	BLLABBBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L3	9	L3-9-2	16	QQYGSSPPT	BBBABABBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024