PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6JWC

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV6-6*01	95.9	Mo_IGHV6-6*01	84.6	H1	13	H1-13-1	8	VASGFIFSDAWMD	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV6-6*01	95.9	Mo_IGHV6-6*01	66.7	H2	12	H2-12-1	11	EIRSKANglAPY	BBBBAAALLBBB
H	heavy	Mus.musculus	Mo_IGHV6-6*01	95.9	Mo_IGHV6-6*01	50.0	H3	9	H3-9-*	-1	TSTLYYFDY	BBBBEABBB
H	heavy	Mus.musculus	Mo_IGHV6-6*01	95.9	Mo_IGHV6-6*01	100.0	H4	8	H4-8-1	6	RDDSKSSV	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV4-79*01	97.1	Mo_IGKV4-79*01	83.3	L1	12	L1-12-1	6	SASSSVRsSYLC	BBABBBBAAABB
L	kappa	Mus.musculus	Mo_IGKV4-79*01	97.1	Mo_IGKV4-79*01	75.0	L2	8	L2-8-1	8	YSTSKLPS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV4-79*01	97.1	Mo_IGKV4-79*01	87.5	L3	9	L3-9-cis7-1	9	HQWSSYPRT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV4-79*01	97.1	Mo_IGKV4-79*01	100.0	L4	6	L4-6-1	9	GSGTSY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024