PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6IYN

#CDRs = 4; #Clusters = 5.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H1	13	H1-13-*	-1	AASGRTFSSYAMG	BBBBBBAAABBBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	50.0	H2	10	H2-10-2	13	VVNWSGRRTY	BBBAALABBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H3	15	H3-15-*	-1	AAGKWDGsYYGAPDY
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	10	RDNAKNTV	BBAAALBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H1	13	H1-13-*	-1	AASGRTFSSYAMG	BBBABBAAABBBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	50.0	H2	10	H2-10-2	14	VVNWSGRRTY	BBBAALABBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H3	15	H3-15-*	-1	AAGKWDGsYYGAPDY
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	14	RDNAKNTV	BBAAALBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H1	13	H1-13-*	-1	AASGRTFSSYAMG	BBBEBBAAABBBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	50.0	H2	10	H2-10-2	10	VVNWSGRRTY	BBBAALABBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H3	15	H3-15-*	-1	AAGKWDGsYYGAPDY
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	12	RDNAKNTV	BBAAALBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H1	13	H1-13-*	-1	AASGRTFSSYAMG	BBBEBBAAABBBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	50.0	H2	10	H2-10-2	10	VVNWSGRRTY	BBBAALABBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H3	15	H3-15-*	-1	AAGKWDGsYYGAPDY
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	12	RDNAKNTV	BBAAALBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H1	13	H1-13-*	-1	AASGRTFSSYAMG	BBBEBBAAABBBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	50.0	H2	10	H2-10-2	13	VVNWSGRRTY	BBBAALABBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H3	15	H3-15-*	-1	AAGKWDGsYYGAPDY
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	11	RDNAKNTV	BBAAALBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H1	13	H1-13-1	25	AASGRTFSSYAMG	BBBEBBAAABBBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	50.0	H2	10	H2-10-2	15	VVNWSGRRTY	BBBAALABBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H3	15	H3-15-*	-1	AAGKWDGsYYGAPDY
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	16	RDNAKNTV	BBAAALBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H1	13	H1-13-*	-1	AASGRTFSSYAMG	BBBEBBAAABBBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	50.0	H2	10	H2-10-2	9	VVNWSGRRTY	BBBAALABBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H3	15	H3-15-*	-1	AAGKWDGsYYGAPDY
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	14	RDNAKNTV	BBAAALBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H1	13	H1-13-1	25	AASGRTFSSYAMG	BBBEBBAAABBBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	50.0	H2	10	H2-10-2	9	VVNWSGRRTY	BBBAALABBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H3	15	H3-15-*	-1	AAGKWDGsYYGAPDY
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	12	RDNAKNTV	BBAAALBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H1	13	H1-13-*	-1	AASGRTFSSYAMG	BBBBBAAAABBBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	50.0	H2	10	H2-10-2	14	VVNWSGRRTY	BBBAALABBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H3	15	H3-15-*	-1	AAGKWDGsYYGAPDY
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	12	RDNAKNTV	BBAAALBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H1	13	H1-13-*	-1	AASGRTFSSYAMG	BBBABBAAABBBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	50.0	H2	10	H2-10-2	10	VVNWSGRRTY	BBBAALABBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H3	15	H3-15-*	-1	AAGKWDGsYYGAPDY
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	11	RDNAKNTV	BBAAALBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H1	13	H1-13-*	-1	AASGRTFSSYAMG	BBBEBBAAABBBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	50.0	H2	10	H2-10-2	10	VVNWSGRRTY	BBBAALABBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H3	15	H3-15-*	-1	AAGKWDGsYYGAPDY
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	12	RDNAKNTV	BBAAALBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H1	13	H1-13-*	-1	AASGRTFSSYAMG	BBBABBAAABBBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	50.0	H2	10	H2-10-2	15	VVNWSGRRTY	BBBAALABBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H3	15	H3-15-*	-1	AAGKWDGsYYGAPDY
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	11	RDNAKNTV	BBAAALBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H1	13	H1-13-*	-1	AASGRTFSSYAMG	BBBEBBAAABBBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	50.0	H2	10	H2-10-2	12	VVNWSGRRTY	BBBAALABBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H3	15	H3-15-*	-1	AAGKWDGsYYGAPDY
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	14	RDNAKNTV	BBAAALBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H1	13	H1-13-*	-1	AASGRTFSSYAMG	BBBEBBAAABBBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	50.0	H2	10	H2-10-2	13	VVNWSGRRTY	BBBAALABBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H3	15	H3-15-*	-1	AAGKWDGsYYGAPDY
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	10	RDNAKNTV	BBAAALBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H1	13	H1-13-*	-1	AASGRTFSSYAMG	BBBEBBAAABBBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	50.0	H2	10	H2-10-2	13	VVNWSGRRTY	BBBAALABBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H3	15	H3-15-*	-1	AAGKWDGsYYGAPDY
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	14	RDNAKNTV	BBAAALBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H1	13	H1-13-*	-1	AASGRTFSSYAMG	BBBEBBAAABBBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	50.0	H2	10	H2-10-2	13	VVNWSGRRTY	BBBAALABBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H3	15	H3-15-*	-1	AAGKWDGsYYGAPDY
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	12	RDNAKNTV	BBAAALBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H1	13	H1-13-*	-1	AASGRTFSSYAMG	BBBBBAAAABBBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	50.0	H2	10	H2-10-2	11	VVNWSGRRTY	BBBAALABBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H3	15	H3-15-*	-1	AAGKWDGsYYGAPDY
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	12	RDNAKNTV	BBAAALBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H1	13	H1-13-*	-1	AASGRTFSSYAMG	BBBABBAAABBBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	50.0	H2	10	H2-10-2	14	VVNWSGRRTY	BBBAALABBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H3	15	H3-15-*	-1	AAGKWDGsYYGAPDY
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	11	RDNAKNTV	BBAAALBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H1	13	H1-13-*	-1	AASGRTFSSYAMG	BBBEBBAAABBBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	50.0	H2	10	H2-10-2	12	VVNWSGRRTY	BBBAALABBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H3	15	H3-15-*	-1	AAGKWDGsYYGAPDY
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	9	RDNAKNTV	BBAAALBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H1	13	H1-13-1	24	AASGRTFSSYAMG	BBBEBBAAABBBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	50.0	H2	10	H2-10-2	12	VVNWSGRRTY	BBBAALABBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H3	15	H3-15-*	-1	AAGKWDGsYYGAPDY
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	9	RDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024