PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6IEB

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	heavy	Homo.sapiens	Hu_IGHV4-59*01	98.6	Hu_IGHV4-59*01	92.3	H1	13	H1-13-*	-1	TVSGGSISTYYWS	BBBLEBBAABBBB
E	heavy	Homo.sapiens	Hu_IGHV4-59*01	98.6	Hu_IGHV4-59*01	100.0	H2	9	H2-9-1	14	YIYYSGSTN	BBBAALBBB
E	heavy	Homo.sapiens	Hu_IGHV4-59*01	98.6	Hu_IGHV4-59*01	100.0	H3	12	H3-12-*	-1	ARSDYGDLIFDY	BBBABAALBBAB
E	heavy	Homo.sapiens	Hu_IGHV4-59*01	98.6	Hu_IGHV4-59*01	100.0	H4	8	H4-8-1	10	VDTSKNQF	BBAAALBB
F	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	90.9	L1	11	L1-11-3	8	SGDKLGDKYVC	BBBLAAABBBB
F	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L2	8	L2-8-1	11	YQDSKRPS	BLLABBBB
F	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	75.0	L3	8	L3-8-*	-1	QACDSSTV	BBBBABBB
F	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L4	6	L4-6-2	13	NSGNTA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV4-59*01	98.6	Hu_IGHV4-59*01	92.3	H1	13	H1-13-*	-1	TVSGGSISTYYWS	BBBLEBAEABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*01	98.6	Hu_IGHV4-59*01	100.0	H2	9	H2-9-1	16	YIYYSGSTN	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*01	98.6	Hu_IGHV4-59*01	100.0	H3	12	H3-12-*	-1	ARSDYGDLIFDY	BBBABAALBBAB
H	heavy	Homo.sapiens	Hu_IGHV4-59*01	98.6	Hu_IGHV4-59*01	100.0	H4	8	H4-8-1	13	VDTSKNQF	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	90.9	L1	11	L1-11-3	8	SGDKLGDKYVC	BBBLAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L2	8	L2-8-1	14	YQDSKRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	75.0	L3	8	L3-8-*	-1	QACDSSTV	BBBBABBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L4	6	L4-6-2	14	NSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024