PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6H6Z

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	89.0	Al_IGHV3-3*01_VHH	46.2	H1	13	H1-13-5	13	AVSGRTIDVSVMA	BBBEBAAABABBB
C	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	89.0	Al_IGHV3-3*01_VHH	50.0	H2	10	H2-10-*	-1	GMRWSGMTTY	BBBAABABBB
C	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	89.0	Al_IGHV3-3*01_VHH	100.0	H3	19	H3-19-*	-1	AARSRFivgvpQARDLYDY
C	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	89.0	Al_IGHV3-3*01_VHH	75.0	H4	8	H4-8-*	-1	RDKTKNTV	BBAABBBB
D	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	89.0	Al_IGHV3-3*01_VHH	46.2	H1	13	H1-13-5	13	AVSGRTIDVSVMA	BBBEBAAABABBB
D	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	89.0	Al_IGHV3-3*01_VHH	50.0	H2	10	H2-10-*	-1	GMRWSGMTTY	BBBAABABBB
D	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	89.0	Al_IGHV3-3*01_VHH	100.0	H3	19	H3-19-*	-1	AARSRFivgvpQARDLYDY
D	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	89.0	Al_IGHV3-3*01_VHH	75.0	H4	8	H4-8-*	-1	RDKTKNTV	BBAABBBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024