PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6BZV

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV3-8*02	98.6	Mo_IGHV3-8*02	100.0	H1	13	H1-13-*	-1	SVTGDSITSGYWN	BBBLBBAABEBBB
A	heavy	Mus.musculus	Mo_IGHV3-8*02	98.6	Mo_IGHV3-8*02	100.0	H2	9	H2-9-1	11	YISYSGSTY	BBBAALBBB
A	heavy	Mus.musculus	Mo_IGHV3-8*02	98.6	Mo_IGHV3-8*02	100.0	H3	12	H3-12-1	12	ARLYDGYYAMDY	BBBBAAALBBAB
A	heavy	Mus.musculus	Mo_IGHV3-8*02	98.6	Mo_IGHV3-8*02	100.0	H4	8	H4-8-1	14	RDTSKNQY	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV3-10*01	98.5	Mo_IGKV3-10*01	100.0	L1	15	L1-15-1	9	RASESVDSYgnsfMH	BBABBABBLLBBBBB
B	kappa	Mus.musculus	Mo_IGKV3-10*01	98.5	Mo_IGKV3-10*01	100.0	L2	8	L2-8-1	8	YLASNLES	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV3-10*01	98.5	Mo_IGKV3-10*01	100.0	L3	9	L3-9-cis7-1	12	QQNNEDPWT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV3-10*01	98.5	Mo_IGKV3-10*01	100.0	L4	6	L4-6-3	26	GSRTDF	EAAABB
C	heavy	Mus.musculus	Mo_IGHV3-8*02	98.6	Mo_IGHV3-8*02	100.0	H1	13	H1-13-*	-1	SVTGDSITSGYWN	BBBLBBAABEBBB
C	heavy	Mus.musculus	Mo_IGHV3-8*02	98.6	Mo_IGHV3-8*02	100.0	H2	9	H2-9-1	12	YISYSGSTY	BBBAALBBB
C	heavy	Mus.musculus	Mo_IGHV3-8*02	98.6	Mo_IGHV3-8*02	100.0	H3	12	H3-12-1	12	ARLYDGYYAMDY	BBBBAAALBBAB
C	heavy	Mus.musculus	Mo_IGHV3-8*02	98.6	Mo_IGHV3-8*02	100.0	H4	8	H4-8-1	14	RDTSKNQY	BBAAALBB
D	kappa	Mus.musculus	Mo_IGKV3-10*01	98.5	Mo_IGKV3-10*01	100.0	L1	15	L1-15-1	9	RASESVDSYgnsfMH	BBABBABBLLBBBBB
D	kappa	Mus.musculus	Mo_IGKV3-10*01	98.5	Mo_IGKV3-10*01	100.0	L2	8	L2-8-1	8	YLASNLES	BLLABBBB
D	kappa	Mus.musculus	Mo_IGKV3-10*01	98.5	Mo_IGKV3-10*01	100.0	L3	9	L3-9-cis7-1	12	QQNNEDPWT	BBAABBbBB
D	kappa	Mus.musculus	Mo_IGKV3-10*01	98.5	Mo_IGKV3-10*01	100.0	L4	6	L4-6-3	25	GSRTDF	EAAABB
E	heavy	Mus.musculus	Mo_IGHV3-8*02	98.6	Mo_IGHV3-8*02	100.0	H1	13	H1-13-*	-1	SVTGDSITSGYWN	BBBLBBAABEBBB
E	heavy	Mus.musculus	Mo_IGHV3-8*02	98.6	Mo_IGHV3-8*02	100.0	H2	9	H2-9-1	12	YISYSGSTY	BBBAALBBB
E	heavy	Mus.musculus	Mo_IGHV3-8*02	98.6	Mo_IGHV3-8*02	100.0	H3	12	H3-12-1	12	ARLYDGYYAMDY	BBBBAAALBBAB
E	heavy	Mus.musculus	Mo_IGHV3-8*02	98.6	Mo_IGHV3-8*02	100.0	H4	8	H4-8-1	14	RDTSKNQY	BBAAALBB
F	kappa	Mus.musculus	Mo_IGKV3-10*01	98.5	Mo_IGKV3-10*01	100.0	L1	15	L1-15-1	9	RASESVDSYgnsfMH	BBABBABBLLBBBBB
F	kappa	Mus.musculus	Mo_IGKV3-10*01	98.5	Mo_IGKV3-10*01	100.0	L2	8	L2-8-1	8	YLASNLES	BLLABBBB
F	kappa	Mus.musculus	Mo_IGKV3-10*01	98.5	Mo_IGKV3-10*01	100.0	L3	9	L3-9-cis7-1	12	QQNNEDPWT	BBAABBbBB
F	kappa	Mus.musculus	Mo_IGKV3-10*01	98.5	Mo_IGKV3-10*01	100.0	L4	6	L4-6-3	20	GSRTDF	BBAABB
G	heavy	Mus.musculus	Mo_IGHV3-8*02	98.6	Mo_IGHV3-8*02	100.0	H1	13	H1-13-*	-1	SVTGDSITSGYWN	BBBLBBAABEBBB
G	heavy	Mus.musculus	Mo_IGHV3-8*02	98.6	Mo_IGHV3-8*02	100.0	H2	9	H2-9-1	11	YISYSGSTY	BBBAALBBB
G	heavy	Mus.musculus	Mo_IGHV3-8*02	98.6	Mo_IGHV3-8*02	100.0	H3	12	H3-12-1	12	ARLYDGYYAMDY	BBBBAAALBBAB
G	heavy	Mus.musculus	Mo_IGHV3-8*02	98.6	Mo_IGHV3-8*02	100.0	H4	8	H4-8-1	13	RDTSKNQY	BBAAALBB
H	kappa	Mus.musculus	Mo_IGKV3-10*01	98.5	Mo_IGKV3-10*01	100.0	L1	15	L1-15-1	9	RASESVDSYgnsfMH	BBABBABBLLBBBBB
H	kappa	Mus.musculus	Mo_IGKV3-10*01	98.5	Mo_IGKV3-10*01	100.0	L2	8	L2-8-1	8	YLASNLES	BLLABBBB
H	kappa	Mus.musculus	Mo_IGKV3-10*01	98.5	Mo_IGKV3-10*01	100.0	L3	9	L3-9-cis7-1	12	QQNNEDPWT	BBAABBbBB
H	kappa	Mus.musculus	Mo_IGKV3-10*01	98.5	Mo_IGKV3-10*01	100.0	L4	6	L4-6-3	16	GSRTDF	EBAABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024