PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5XCU

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV5-6*02	100.0	Mo_IGHV5-6*02	100.0	H1	13	H1-13-1	9	AASGFTFSSYGMS	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV5-6*02	100.0	Mo_IGHV5-6*02	90.0	H2	10	H2-10-2	7	TISRGGSYTY	BBBAALABBB
A	heavy	Mus.musculus	Mo_IGHV5-6*02	100.0	Mo_IGHV5-6*02	100.0	H3	13	H3-13-*	-1	ARRETYDEKGFAY	BBBBAAALAEBAB
A	heavy	Mus.musculus	Mo_IGHV5-6*02	100.0	Mo_IGHV5-6*02	100.0	H4	8	H4-8-1	6	RDNAKNTL	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV8-19*01	95.7	Mo_IGKV8-19*01	100.0	L1	17	L1-17-1	11	KSSQSLlnsgnqKNYLT	BBABBABBAAALBBBBB
B	kappa	Mus.musculus	Mo_IGKV8-19*01	95.7	Mo_IGKV8-19*01	100.0	L2	8	L2-8-1	8	YWASTRES	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV8-19*01	95.7	Mo_IGKV8-19*01	71.4	L3	9	L3-9-cis7-1	14	QNDNSHPLT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV8-19*01	95.7	Mo_IGKV8-19*01	83.3	L4	6	L4-6-1	12	GSGRDF	EBEABB
D	heavy	Mus.musculus	Mo_IGHV5-6*02	100.0	Mo_IGHV5-6*02	100.0	H1	13	H1-13-1	11	AASGFTFSSYGMS	BBBLBBAAABBBB
D	heavy	Mus.musculus	Mo_IGHV5-6*02	100.0	Mo_IGHV5-6*02	90.0	H2	10	H2-10-2	9	TISRGGSYTY	BBBAALABBB
D	heavy	Mus.musculus	Mo_IGHV5-6*02	100.0	Mo_IGHV5-6*02	100.0	H3	13	H3-13-*	-1	ARRETYDEKGFAY	BBBBAAALAEBAB
D	heavy	Mus.musculus	Mo_IGHV5-6*02	100.0	Mo_IGHV5-6*02	100.0	H4	8	H4-8-1	5	RDNAKNTL	BBAAALBB
E	kappa	Mus.musculus	Mo_IGKV8-19*01	95.7	Mo_IGKV8-19*01	100.0	L1	17	L1-17-1	10	KSSQSLlnsgnqKNYLT	BBABBABBAAALBBBBB
E	kappa	Mus.musculus	Mo_IGKV8-19*01	95.7	Mo_IGKV8-19*01	100.0	L2	8	L2-8-1	5	YWASTRES	BLLABBBB
E	kappa	Mus.musculus	Mo_IGKV8-19*01	95.7	Mo_IGKV8-19*01	71.4	L3	9	L3-9-cis7-1	14	QNDNSHPLT	BBAABBbBB
E	kappa	Mus.musculus	Mo_IGKV8-19*01	95.7	Mo_IGKV8-19*01	83.3	L4	6	L4-6-1	6	GSGRDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024