PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5WKO

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-69*17	90.4	Hu_IGHV1-69*17	69.2	H1	13	H1-13-*	-1	RASGGTFGNYAIN	BBBBEBBLABBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*17	90.4	Hu_IGHV1-69*17	60.0	H2	10	H2-10-*	-1	GISPIFGPPK	EBBAAAEBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*17	90.4	Hu_IGHV1-69*17	100.0	H3	16	H3-16-*	-1	ARKLEppYYFYSYMDV
A	heavy	Homo.sapiens	Hu_IGHV1-69*17	90.4	Hu_IGHV1-69*17	75.0	H4	8	H4-8-1	11	ADISSSTA	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L1	12	L1-12-*	-1	RASQSVSsSYLA	BBABBAEBBBBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L2	8	L2-8-4	21	YGASSRAT	BEAABBBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	71.4	L3	9	L3-9-2	27	QQYVSTPLT	BBAABEBBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
C	heavy	Homo.sapiens	Hu_IGHV1-69*17	90.4	Hu_IGHV1-69*17	69.2	H1	13	H1-13-*	-1	RASGGTFGNYAIN	BBBBBLBLABBBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*17	90.4	Hu_IGHV1-69*17	60.0	H2	10	H2-10-*	-1	GISPIFGPPK	EBBAAAEBBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*17	90.4	Hu_IGHV1-69*17	100.0	H3	16	H3-16-*	-1	ARKLEppYYFYSYMDV
C	heavy	Homo.sapiens	Hu_IGHV1-69*17	90.4	Hu_IGHV1-69*17	75.0	H4	8	H4-8-1	11	ADISSSTA	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L1	12	L1-12-*	-1	RASQSVSsSYLA	BBABBAEBBBBB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L2	8	L2-8-4	21	YGASSRAT	BEAABBBB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	71.4	L3	9	L3-9-cis7-1	10	QQYVSTPLT	BBAABBbBB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
E	heavy	Homo.sapiens	Hu_IGHV1-69*17	90.4	Hu_IGHV1-69*17	69.2	H1	13	H1-13-*	-1	RASGGTFGNYAIN	BBBEEBBLABBBB
E	heavy	Homo.sapiens	Hu_IGHV1-69*17	90.4	Hu_IGHV1-69*17	60.0	H2	10	H2-10-*	-1	GISPIFGPPK	EBBAAAEBBB
E	heavy	Homo.sapiens	Hu_IGHV1-69*17	90.4	Hu_IGHV1-69*17	100.0	H3	16	H3-16-*	-1	ARKLEppYYFYSYMDV
E	heavy	Homo.sapiens	Hu_IGHV1-69*17	90.4	Hu_IGHV1-69*17	75.0	H4	8	H4-8-1	11	ADISSSTA	BBAAALBB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L1	12	L1-12-*	-1	RASQSVSsSYLA	BBABBBBEBBBB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L2	8	L2-8-4	21	YGASSRAT	BEAABBBB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	71.4	L3	9	L3-9-cis7-1	10	QQYVSTPLT	BBAABBbBB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
G	heavy	Homo.sapiens	Hu_IGHV1-69*17	90.4	Hu_IGHV1-69*17	69.2	H1	13	H1-13-*	-1	RASGGTFGNYAIN	BBBEEBBLABBBB
G	heavy	Homo.sapiens	Hu_IGHV1-69*17	90.4	Hu_IGHV1-69*17	60.0	H2	10	H2-10-*	-1	GISPIFGPPK	EBBAAAEBBB
G	heavy	Homo.sapiens	Hu_IGHV1-69*17	90.4	Hu_IGHV1-69*17	100.0	H3	16	H3-16-*	-1	ARKLEppYYFYSYMDV
G	heavy	Homo.sapiens	Hu_IGHV1-69*17	90.4	Hu_IGHV1-69*17	75.0	H4	8	H4-8-1	11	ADISSSTA	BBAAALBB
H	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L1	12	L1-12-*	-1	RASQSVSsSYLA	BBABBBBEBBBB
H	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L2	8	L2-8-4	21	YGASSRAT	BEAABBBB
H	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	71.4	L3	9	L3-9-cis7-1	10	QQYVSTPLT	BBAABBbBB
H	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
I	heavy	Homo.sapiens	Hu_IGHV1-69*17	90.4	Hu_IGHV1-69*17	69.2	H1	13	H1-13-*	-1	RASGGTFGNYAIN	BBBEEBBLABBBB
I	heavy	Homo.sapiens	Hu_IGHV1-69*17	90.4	Hu_IGHV1-69*17	60.0	H2	10	H2-10-*	-1	GISPIFGPPK	EBBAAAEBBB
I	heavy	Homo.sapiens	Hu_IGHV1-69*17	90.4	Hu_IGHV1-69*17	100.0	H3	16	H3-16-*	-1	ARKLEppYYFYSYMDV
I	heavy	Homo.sapiens	Hu_IGHV1-69*17	90.4	Hu_IGHV1-69*17	75.0	H4	8	H4-8-1	11	ADISSSTA	BBAAALBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L1	12	L1-12-*	-1	RASQSVSsSYLA	BBABBBBEABBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L2	8	L2-8-4	21	YGASSRAT	BEAABBBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	71.4	L3	9	L3-9-cis7-1	10	QQYVSTPLT	BBAABBbBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
K	heavy	Homo.sapiens	Hu_IGHV1-69*17	90.4	Hu_IGHV1-69*17	69.2	H1	13	H1-13-*	-1	RASGGTFGNYAIN	BBBEEBBLABBBB
K	heavy	Homo.sapiens	Hu_IGHV1-69*17	90.4	Hu_IGHV1-69*17	60.0	H2	10	H2-10-*	-1	GISPIFGPPK	EBBAAAEBBB
K	heavy	Homo.sapiens	Hu_IGHV1-69*17	90.4	Hu_IGHV1-69*17	100.0	H3	16	H3-16-*	-1	ARKLEppYYFYSYMDV
K	heavy	Homo.sapiens	Hu_IGHV1-69*17	90.4	Hu_IGHV1-69*17	75.0	H4	8	H4-8-1	11	ADISSSTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L1	12	L1-12-*	-1	RASQSVSsSYLA	BBABBBBEBBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L2	8	L2-8-4	21	YGASSRAT	BEAABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	71.4	L3	9	L3-9-cis7-1	10	QQYVSTPLT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB

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