PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5W3O

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	heavy	Mus.musculus	Mo_IGHV2-6-7*01	83.3	Mo_IGHV2-6-7*01	76.9	H1	13	H1-13-1	22	TVAGFSLTAYGVA	BBBLBBAAABBBB
D	heavy	Mus.musculus	Mo_IGHV2-6-7*01	83.3	Mo_IGHV2-6-7*01	55.6	H2	9	H2-9-1	30	AIWAAGATD	BBBABLBBB
D	heavy	Mus.musculus	Mo_IGHV2-6-7*01	83.3	Mo_IGHV2-6-7*01	100.0	H3	10	H3-10-*	-1	AREWDAYGDY	BBBBLLBBBL
D	heavy	Mus.musculus	Mo_IGHV2-6-7*01	83.3	Mo_IGHV2-6-7*01	100.0	H4	8	H4-8-1	12	KDNSKSQV	BBAAALBB
E	kappa	Mus.musculus	Mo_IGKV12-41*01	76.8	Mo_IGKV12-41*01	90.9	L1	11	L1-11-2	22	RASGNIHNALA	BBABBALLBBB
E	kappa	Mus.musculus	Mo_IGKV12-41*01	76.8	Mo_IGKV12-41*01	50.0	L2	8	L2-8-1	14	YAAAALAA	BLLABBBB
E	kappa	Mus.musculus	Mo_IGKV12-41*01	76.8	Mo_IGKV12-41*01	100.0	L3	9	L3-9-cis7-*	-1	QHFWSTPYT	BBAAAEbBB
E	kappa	Mus.musculus	Mo_IGKV12-41*01	76.8	Mo_IGKV12-41*01	83.3	L4	6	L4-6-1	20	GSGTAY	EBEABB

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