PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5VNW

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Synthetic.construct	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	53.8	H1	13	H1-13-*	-1	AASGYISDAYYMG	BBABBBBAABBBB
C	heavy	Synthetic.construct	Al_IGHV3-3*01_VHH	97.3	CDRLenMismatch	-1.0	H2	9	H2-9-*	-1	TITHGTNTY	BBBBLLBBB
C	heavy	Synthetic.construct	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	50.0	H3	12	H3-12-1	17	AVLETRSYSFRY	BBBBAAALBBAB
C	heavy	Synthetic.construct	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	8	RDNAKNTV	BBAAALBB
D	heavy	Synthetic.construct	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	53.8	H1	13	H1-13-*	-1	AASGYISDAYYMG	BBABBBBAABBBB
D	heavy	Synthetic.construct	Al_IGHV3-3*01_VHH	97.3	CDRLenMismatch	-1.0	H2	9	H2-9-*	-1	TITHGTNTY	BBBLLABBB
D	heavy	Synthetic.construct	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	50.0	H3	12	H3-12-1	18	AVLETRSYSFRY	BBBBAAALBBAB
D	heavy	Synthetic.construct	Al_IGHV3-3*01_VHH	97.3	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	10	RDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024