PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5V6M

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	91.7	CDRLenMismatch	-1.0	H1	13	H1-13-*	-1	KASGFSFSAIAMC	BBBLBBBBLBBBB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	91.7	CDRLenMismatch	-1.0	H2	10	H2-10-1	8	CIATDTGSTY	BBBAAALBBB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	91.7	Rb_IGHV1S45*01	100.0	H3	6	H3-6-2	9	ARNFYL	BBLLAB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	91.7	Rb_IGHV1S45*01	71.4	H4	7	H4-7-1	16	NPSSTTV	BABAABB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S12*01	91.0	Rb_IGKV1S12*01	76.9	L1	13	L1-13-*	-1	QSSQSVypNNNLG	BBABBBBbAABBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S12*01	91.0	Rb_IGKV1S12*01	87.5	L2	8	L2-8-1	5	YEASTLAS	BLLABBBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S12*01	91.0	Rb_IGKV1S12*01	33.3	L3	13	L3-13-2	8	LGAYDFTVaegaA	BBBBBAAABBABB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S12*01	91.0	Rb_IGKV1S12*01	100.0	L4	6	L4-6-1	9	GSGTQF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024