PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5UKQ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	89.0	CDRLenMismatch	-1.0	H1	14	H1-14-2	13	AVSGGSIgDDYYWN	BBBLEBAABBBBBB
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	89.0	Ma_IGHV4-2*01	50.0	H2	10	H2-10-1	12	SIYGSFGGTN	BBBAAALBBB
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	89.0	Ma_IGHV4-2*01	100.0	H3	17	H3-17-*	-1	ARGSHSIVvlfGYYFDY
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	89.0	Ma_IGHV4-2*01	62.5	H4	8	H4-8-1	9	MDTSNNQV	BBAAALBB
L	lambda	Macaca.mulatta	Ma_IGLV2S9*01	94.1	Ma_IGLV2S9*01	64.3	L1	14	L1-14-2	5	SGTTNDIGaYNGVS	BBBAAAAAABBABB
L	lambda	Macaca.mulatta	Ma_IGLV2S9*01	94.1	Ma_IGLV2S9*01	75.0	L2	8	L2-8-1	9	YEVNKRPS	BLLABBBB
L	lambda	Macaca.mulatta	Ma_IGLV2S9*01	94.1	Ma_IGLV2S9*01	77.8	L3	10	L3-10-*	-1	GSYRSGSTWV	BBBBBLLBBB
L	lambda	Macaca.mulatta	Ma_IGLV2S9*01	94.1	Ma_IGLV2S9*01	100.0	L4	6	L4-6-2	7	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024