PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5UG0

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	83.3	L1	12	L1-12-*	-1	RASQSVSSyYLG	BBABBALEAABB
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	62.5	L2	8	L2-8-*	-1	YETSRRAT	BLEABBBA
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	71.4	L3	10	L3-10-cis78-*	-1	QHYGVSPvIT	BBBEBAaBAE
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	20	GSGTDF	EBEABB
D	heavy	Homo.sapiens	Hu_IGHV3-13*01	95.9	Hu_IGHV3-13*01	84.6	H1	13	H1-13-1	14	AASGFTFNIYDMH	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-13*01	95.9	Hu_IGHV3-13*01	77.8	H2	9	H2-9-1	16	SITTAGDTY	BBBAALBBB
D	heavy	Homo.sapiens	Hu_IGHV3-13*01	95.9	Hu_IGHV3-13*01	50.0	H3	21	H3-21-*	-1	TRGVREVGatgddpfYYGMYV
D	heavy	Homo.sapiens	Hu_IGHV3-13*01	95.9	Hu_IGHV3-13*01	100.0	H4	8	H4-8-1	15	RENAKNSL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024