PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5UEM

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV1-2*07	64.4	Hu_IGHV1-2*07	53.8	H1	13	H1-13-1	10	EADGYEFPDYYIH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-2*07	64.4	None	-1.0	H2	11	H2-11-*	-1	LIKVGhGGGAM	BBBAABLLBBB
H	heavy	Homo.sapiens	Hu_IGHV1-2*07	64.4	Hu_IGHV1-2*07	50.0	H3	21	H3-21-*	-1	SRDNFgtrpvpgRGYYYGMDV
H	heavy	Homo.sapiens	Hu_IGHV1-2*07	64.4	Hu_IGHV1-2*07	50.0	H4	8	H4-8-1	7	RDIHTTTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	84.1	Hu_IGKV3-20*01	50.0	L1	12	L1-12-*	-1	RASYGLDtSHLA	BBAAEBBAAABB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	84.1	Hu_IGKV3-20*01	62.5	L2	8	L2-8-1	12	YGTSSRPP	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	84.1	Hu_IGKV3-20*01	28.6	L3	10	L3-10-cis78-*	-1	QNSGgGTPLI	BBAAABbbBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	84.1	Hu_IGKV3-20*01	100.0	L4	6	L4-6-*	-1	GSGTDF	BALABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024