PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5HI5

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H1	13	H1-13-1	10	AASGFTFSSYAMS	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H2	10	H2-10-2	7	AISGSGGSTY	BBBAALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	50.0	H3	11	H3-11-*	-1	ARDLIHGVTRN	BBBABBLBBAB
C	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	4	RDNSKNTL	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	76.9	L1	13	L1-13-2	7	TRSSGSLANYYVQ	BBABEBAAABBBB
D	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	62.5	L2	8	L2-8-1	8	FANNQRPS	BLLABBBB
D	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	42.9	L3	9	L3-9-3	20	QTYDPYSVV	BBBBAABBB
D	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	100.0	L4	8	L4-8-1	5	idSSSNSA	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H1	13	H1-13-1	10	AASGFTFSSYAMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H2	10	H2-10-2	7	AISGSGGSTY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	50.0	H3	11	H3-11-*	-1	ARDLIHGVTRN	BBBABBLBBAB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	5	RDNSKNTL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	76.9	L1	13	L1-13-2	7	TRSSGSLANYYVQ	BBABEBAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	62.5	L2	8	L2-8-1	8	FANNQRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	42.9	L3	9	L3-9-3	24	QTYDPYSVV	BBBBAABBB
L	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	100.0	L4	8	L4-8-1	5	idSSSNSA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024