PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5FUU

#CDRs = 8; #Clusters = 11.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-30*10	83.3	Hu_IGHV3-30*10	46.2	H1	13	H1-13-*	-1	VVSDFPFSKYPMY	BBBLBAEAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*10	83.3	Hu_IGHV3-30*10	30.0	H2	10	H2-10-2	16	AISGDAWHVV	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*10	83.3	Hu_IGHV3-30*10	100.0	H3	28	H3-28-*	-1	ARmfqesgpprldrwsGRNYYYYSGMDV
H	heavy	Homo.sapiens	Hu_IGHV3-30*10	83.3	Hu_IGHV3-30*10	87.5	H4	8	H4-8-1	11	RDNVKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV2D-29*02	91.3	Hu_IGKV2D-29*02	68.8	L1	16	L1-16-1	12	KSSESLrqsngKTSLY	BBABBABBAALBBBBB
L	kappa	Homo.sapiens	Hu_IGKV2D-29*02	91.3	Hu_IGKV2D-29*02	87.5	L2	8	L2-8-*	-1	FEVSNRFS	ABBLBBBB
L	kappa	Homo.sapiens	Hu_IGKV2D-29*02	91.3	Hu_IGKV2D-29*02	57.1	L3	9	L3-9-cis7-1	8	MQSKDFPLT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV2D-29*02	91.3	Hu_IGKV2D-29*02	100.0	L4	6	L4-6-1	18	GSGTDF	EBEABB
M	heavy	Homo.sapiens	Hu_IGHV3-30*10	83.3	Hu_IGHV3-30*10	46.2	H1	13	H1-13-1	15	VVSDFPFSKYPMY	BBBLBBAAABBBB
M	heavy	Homo.sapiens	Hu_IGHV3-30*10	83.3	Hu_IGHV3-30*10	30.0	H2	10	H2-10-2	14	AISGDAWHVV	BBBAALABBB
M	heavy	Homo.sapiens	Hu_IGHV3-30*10	83.3	Hu_IGHV3-30*10	100.0	H3	28	H3-28-*	-1	ARmfqesgpprldrwsGRNYYYYSGMDV
M	heavy	Homo.sapiens	Hu_IGHV3-30*10	83.3	Hu_IGHV3-30*10	87.5	H4	8	H4-8-1	9	RDNVKNTL	BBAAALBB
N	kappa	Homo.sapiens	Hu_IGKV2D-29*02	91.3	Hu_IGKV2D-29*02	68.8	L1	16	L1-16-1	19	KSSESLrqsngKTSLY	BBABBABBAALBBBBB
N	kappa	Homo.sapiens	Hu_IGKV2D-29*02	91.3	Hu_IGKV2D-29*02	87.5	L2	8	L2-8-1	25	FEVSNRFS	BLEABBBB
N	kappa	Homo.sapiens	Hu_IGKV2D-29*02	91.3	Hu_IGKV2D-29*02	57.1	L3	9	L3-9-cis7-1	10	MQSKDFPLT	BBAABBbBB
N	kappa	Homo.sapiens	Hu_IGKV2D-29*02	91.3	Hu_IGKV2D-29*02	100.0	L4	6	L4-6-3	24	GSGTDF	EBAABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024