PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5EZL

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV4-2*02	97.2	Mo_IGHV4-2*02	100.0	H1	13	H1-13-1	9	AASGFDFSRYWMS	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV4-2*02	97.2	Mo_IGHV4-2*02	90.0	H2	10	H2-10-2	9	EINPGSSTIK	BBBAALABBB
A	heavy	Mus.musculus	Mo_IGHV4-2*02	97.2	Mo_IGHV4-2*02	100.0	H3	12	H3-12-3	12	ARYGSYVYAMDY	BBBBBLBBBBAB
A	heavy	Mus.musculus	Mo_IGHV4-2*02	97.2	Mo_IGHV4-2*02	100.0	H4	8	H4-8-1	5	RDNAKNTL	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV6-32*01	97.1	Mo_IGKV6-32*01	90.9	L1	11	L1-11-1	5	KASQSVRNDVA	BBABBAEABBB
B	kappa	Mus.musculus	Mo_IGKV6-32*01	97.1	Mo_IGKV6-32*01	87.5	L2	8	L2-8-1	7	YFASNRYT	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV6-32*01	97.1	Mo_IGKV6-32*01	71.4	L3	9	L3-9-cis7-1	16	QQGYTSPRT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV6-32*01	97.1	Mo_IGKV6-32*01	83.3	L4	6	L4-6-1	9	GSGTDF	EBEABB
H	heavy	Mus.musculus	Mo_IGHV4-2*02	97.2	Mo_IGHV4-2*02	100.0	H1	13	H1-13-1	9	AASGFDFSRYWMS	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV4-2*02	97.2	Mo_IGHV4-2*02	90.0	H2	10	H2-10-2	10	EINPGSSTIK	BBBAALABBB
H	heavy	Mus.musculus	Mo_IGHV4-2*02	97.2	Mo_IGHV4-2*02	100.0	H3	12	H3-12-3	11	ARYGSYVYAMDY	BBBBBLBBBBAB
H	heavy	Mus.musculus	Mo_IGHV4-2*02	97.2	Mo_IGHV4-2*02	100.0	H4	8	H4-8-1	6	RDNAKNTL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV6-32*01	97.1	Mo_IGKV6-32*01	90.9	L1	11	L1-11-1	5	KASQSVRNDVA	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV6-32*01	97.1	Mo_IGKV6-32*01	87.5	L2	8	L2-8-1	8	YFASNRYT	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV6-32*01	97.1	Mo_IGKV6-32*01	71.4	L3	9	L3-9-cis7-1	16	QQGYTSPRT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV6-32*01	97.1	Mo_IGKV6-32*01	83.3	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024