PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5CJS

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.3	Hu_IGLV1-44*01	69.2	L1	13	L1-13-1	8	SGSDSNIGRRSVN	BBBAAAAAABBBB
E	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.3	Hu_IGLV1-44*01	87.5	L2	8	L2-8-*	-1	YSNDQRPS	BLEABBBA
E	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.3	Hu_IGLV1-44*01	88.9	L3	11	L3-11-1	7	AAWDDSLKGAV	BBBBAAALBBB
E	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.3	Hu_IGLV1-44*01	100.0	L4	6	L4-6-2	8	KSGTSA	BBEABB
F	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.7	Hu_IGHV1-69*17	69.2	H1	13	H1-13-1	25	KSSGGTSNNYAIS	BBBLEBAAABBBB
F	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.7	Hu_IGHV1-69*17	60.0	H2	10	H2-10-1	19	GISPIFGSTA	BBBAAALBBB
F	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.7	Hu_IGHV1-69*17	100.0	H3	14	H3-14-*	-1	ARHGNYYYYSGMDV	BBBABABAABBBAB
F	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.7	Hu_IGHV1-69*17	50.0	H4	8	H4-8-1	5	ADIFSNTA	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.7	Hu_IGHV1-69*17	69.2	H1	13	H1-13-1	25	KSSGGTSNNYAIS	BBBLEBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.7	Hu_IGHV1-69*17	60.0	H2	10	H2-10-1	19	GISPIFGSTA	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.7	Hu_IGHV1-69*17	100.0	H3	14	H3-14-*	-1	ARHGNYYYYSGMDV	BBBABABAABBBAB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.7	Hu_IGHV1-69*17	50.0	H4	8	H4-8-1	7	ADIFSNTA	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.3	Hu_IGLV1-44*01	69.2	L1	13	L1-13-1	8	SGSDSNIGRRSVN	BBBAAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.3	Hu_IGLV1-44*01	87.5	L2	8	L2-8-*	-1	YSNDQRPS	BLEABBBA
L	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.3	Hu_IGLV1-44*01	88.9	L3	11	L3-11-1	7	AAWDDSLKGAV	BBBBAAALBBB
L	lambda	Homo.sapiens	Hu_IGLV1-44*01	92.3	Hu_IGLV1-44*01	100.0	L4	6	L4-6-2	8	KSGTSA	BBEABB

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