PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5CIP

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-69*10	86.1	Hu_IGHV1-69*10	76.9	H1	13	H1-13-*	-1	KASGGSFSTYALS	BBBEEBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*10	86.1	Hu_IGHV1-69*10	60.0	H2	10	H2-10-1	11	GVIPLLTITN	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*10	86.1	Hu_IGHV1-69*10	100.0	H3	20	H3-20-*	-1	AREGTTGWGWlgkpigAFAH
A	heavy	Homo.sapiens	Hu_IGHV1-69*10	86.1	Hu_IGHV1-69*10	87.5	H4	8	H4-8-1	10	ADRSTSTA	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	66.7	L1	12	L1-12-2	6	RASQSVgNNKLA	BBABBBBLLBBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	75.0	L2	8	L2-8-1	9	YGASSRPS	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	71.4	L3	9	L3-9-2	29	QQYGQSLST	BBAABABBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-69*10	86.1	Hu_IGHV1-69*10	76.9	H1	13	H1-13-*	-1	KASGGSFSTYALS	BBBEEBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*10	86.1	Hu_IGHV1-69*10	60.0	H2	10	H2-10-1	15	GVIPLLTITN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*10	86.1	Hu_IGHV1-69*10	100.0	H3	20	H3-20-*	-1	AREGTTGWGWlgkpigAFAH
H	heavy	Homo.sapiens	Hu_IGHV1-69*10	86.1	Hu_IGHV1-69*10	87.5	H4	8	H4-8-1	7	ADRSTSTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	66.7	L1	12	L1-12-2	4	RASQSVgNNKLA	BBABBBBLLBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	75.0	L2	8	L2-8-1	10	YGASSRPS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	71.4	L3	9	L3-9-2	17	QQYGQSLST	BBAABABBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024