PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4UT9

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV1-3*01	94.5	Hu_IGHV1-3*01	100.0	H1	13	H1-13-1	13	KASGYTFTSYAMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-3*01	94.5	Hu_IGHV1-3*01	100.0	H2	10	H2-10-1	16	WINAGNGNTK	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-3*01	94.5	Hu_IGHV1-3*01	100.0	H3	21	H3-21-*	-1	ARDKVDDYGdywfptlWYFDY
H	heavy	Homo.sapiens	Hu_IGHV1-3*01	94.5	Hu_IGHV1-3*01	100.0	H4	8	H4-8-1	11	RDTSASTA	BBAAALBB
I	heavy	Homo.sapiens	Hu_IGHV1-3*01	94.5	Hu_IGHV1-3*01	100.0	H1	13	H1-13-1	13	KASGYTFTSYAMH	BBBLBBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV1-3*01	94.5	Hu_IGHV1-3*01	100.0	H2	10	H2-10-1	16	WINAGNGNTK	BBBAAALBBB
I	heavy	Homo.sapiens	Hu_IGHV1-3*01	94.5	Hu_IGHV1-3*01	100.0	H3	21	H3-21-*	-1	ARDKVDDYGdywfptlWYFDY
I	heavy	Homo.sapiens	Hu_IGHV1-3*01	94.5	Hu_IGHV1-3*01	100.0	H4	8	H4-8-1	12	RDTSASTA	BBAAALBB
J	heavy	Homo.sapiens	Hu_IGHV1-3*01	94.5	Hu_IGHV1-3*01	100.0	H1	13	H1-13-1	13	KASGYTFTSYAMH	BBBLBBAAABBBB
J	heavy	Homo.sapiens	Hu_IGHV1-3*01	94.5	Hu_IGHV1-3*01	100.0	H2	10	H2-10-1	16	WINAGNGNTK	BBBAAALBBB
J	heavy	Homo.sapiens	Hu_IGHV1-3*01	94.5	Hu_IGHV1-3*01	100.0	H3	21	H3-21-*	-1	ARDKVDDYGdywfptlWYFDY
J	heavy	Homo.sapiens	Hu_IGHV1-3*01	94.5	Hu_IGHV1-3*01	100.0	H4	8	H4-8-1	11	RDTSASTA	BBAAALBB
K	heavy	Homo.sapiens	Hu_IGHV1-3*01	94.5	Hu_IGHV1-3*01	100.0	H1	13	H1-13-1	13	KASGYTFTSYAMH	BBBLBBAAABBBB
K	heavy	Homo.sapiens	Hu_IGHV1-3*01	94.5	Hu_IGHV1-3*01	100.0	H2	10	H2-10-1	16	WINAGNGNTK	BBBAAALBBB
K	heavy	Homo.sapiens	Hu_IGHV1-3*01	94.5	Hu_IGHV1-3*01	100.0	H3	21	H3-21-*	-1	ARDKVDDYGdywfptlWYFDY
K	heavy	Homo.sapiens	Hu_IGHV1-3*01	94.5	Hu_IGHV1-3*01	100.0	H4	8	H4-8-1	11	RDTSASTA	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	92.9	L1	14	L1-14-2	18	TGTSSDVGgFNYVS	BBBAAAAAABABBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	62.5	L2	8	L2-8-*	-1	YDVTSRPS	BLEABBBA
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	55.6	L3	10	L3-10-1	14	SSHTSRGTWV	BBBBAALBBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	7	KSGNTA	BBEABB
M	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	92.9	L1	14	L1-14-2	18	TGTSSDVGgFNYVS	BBBAAAAAABABBB
M	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	62.5	L2	8	L2-8-*	-1	YDVTSRPS	BLEABBBA
M	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	55.6	L3	10	L3-10-1	14	SSHTSRGTWV	BBBBAALBBB
M	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	9	KSGNTA	BBEABB
N	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	92.9	L1	14	L1-14-2	18	TGTSSDVGgFNYVS	BBBAAAAAABABBB
N	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	62.5	L2	8	L2-8-*	-1	YDVTSRPS	BLEABBBA
N	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	55.6	L3	10	L3-10-1	14	SSHTSRGTWV	BBBBAALBBB
N	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	7	KSGNTA	BBEABB
O	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	92.9	L1	14	L1-14-2	18	TGTSSDVGgFNYVS	BBBAAAAAABABBB
O	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	62.5	L2	8	L2-8-*	-1	YDVTSRPS	BLEABBBA
O	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	55.6	L3	10	L3-10-1	14	SSHTSRGTWV	BBBBAALBBB
O	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	7	KSGNTA	BBEABB

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