PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4TNV

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
F	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	16	KASGYSFTGYTMN	BBBLBBAAABBBB
F	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	70.0	H2	10	H2-10-1	14	LINPYNGGTS	BBBAAALBBB
F	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	100.0	H3	15	H3-15-*	-1	ARDGDYyRYGRYFDY
F	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	100.0	H4	8	H4-8-1	10	VDKSSSTA	BBAAALBB
G	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	16	KASGYSFTGYTMN	BBBLBBAAABBBB
G	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	70.0	H2	10	H2-10-1	14	LINPYNGGTS	BBBAAALBBB
G	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	100.0	H3	15	H3-15-*	-1	ARDGDYyRYGRYFDY
G	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	100.0	H4	8	H4-8-1	10	VDKSSSTA	BBAAALBB
H	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	16	KASGYSFTGYTMN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	70.0	H2	10	H2-10-1	13	LINPYNGGTS	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	100.0	H3	15	H3-15-*	-1	ARDGDYyRYGRYFDY
H	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	100.0	H4	8	H4-8-1	10	VDKSSSTA	BBAAALBB
I	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	16	KASGYSFTGYTMN	BBBLBBAAABBBB
I	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	70.0	H2	10	H2-10-1	14	LINPYNGGTS	BBBAAALBBB
I	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	100.0	H3	15	H3-15-*	-1	ARDGDYyRYGRYFDY
I	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	100.0	H4	8	H4-8-1	10	VDKSSSTA	BBAAALBB
J	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	16	KASGYSFTGYTMN	BBBLBBAAABBBB
J	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	70.0	H2	10	H2-10-1	15	LINPYNGGTS	BBBAAALBBB
J	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	100.0	H3	15	H3-15-*	-1	ARDGDYyRYGRYFDY
J	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	100.0	H4	8	H4-8-1	10	VDKSSSTA	BBAAALBB
K	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	85.7	L1	14	L1-14-1	9	RSSTGAVTTiNFAN	BBAAEBBBAAALBB
K	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	87.5	L2	8	L2-8-4	18	GGINNRAP	BEAABBBB
K	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	87.5	L3	9	L3-9-4	8	ALWYSNHWV	BBBBEABBB
K	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L4	6	L4-6-*	-1	LIGDKA	BBEABB
L	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	85.7	L1	14	L1-14-1	9	RSSTGAVTTiNFAN	BBAAEBBBAAALBB
L	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	87.5	L2	8	L2-8-4	18	GGINNRAP	BEAABBBB
L	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	87.5	L3	9	L3-9-4	17	ALWYSNHWV	BBBBEABBB
L	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L4	6	L4-6-2	33	LIGDKA	BBEABB
M	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	85.7	L1	14	L1-14-1	9	RSSTGAVTTiNFAN	BBAAEBBBAAALBB
M	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	87.5	L2	8	L2-8-4	18	GGINNRAP	BEAABBBB
M	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	87.5	L3	9	L3-9-4	9	ALWYSNHWV	BBBBLABBB
M	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L4	6	L4-6-2	33	LIGDKA	BBEABB
N	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	85.7	L1	14	L1-14-1	9	RSSTGAVTTiNFAN	BBAAEBBBAAALBB
N	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	87.5	L2	8	L2-8-4	18	GGINNRAP	BEAABBBB
N	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	87.5	L3	9	L3-9-4	9	ALWYSNHWV	BBBBEABBB
N	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L4	6	L4-6-2	33	LIGDKA	BBEABB
O	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	85.7	L1	14	L1-14-1	9	RSSTGAVTTiNFAN	BBAAEBBBAAALBB
O	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	87.5	L2	8	L2-8-4	18	GGINNRAP	BEAABBBB
O	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	87.5	L3	9	L3-9-4	8	ALWYSNHWV	BBBBEABBB
O	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L4	6	L4-6-2	33	LIGDKA	BBEABB
U	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	16	KASGYSFTGYTMN	BBBLBBAAABBBB
U	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	70.0	H2	10	H2-10-1	14	LINPYNGGTS	BBBAAALBBB
U	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	100.0	H3	15	H3-15-*	-1	ARDGDYyRYGRYFDY
U	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	100.0	H4	8	H4-8-1	10	VDKSSSTA	BBAAALBB
V	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	16	KASGYSFTGYTMN	BBBLBBAAABBBB
V	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	70.0	H2	10	H2-10-1	14	LINPYNGGTS	BBBAAALBBB
V	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	100.0	H3	15	H3-15-*	-1	ARDGDYyRYGRYFDY
V	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	100.0	H4	8	H4-8-1	10	VDKSSSTA	BBAAALBB
W	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	16	KASGYSFTGYTMN	BBBLBBAAABBBB
W	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	70.0	H2	10	H2-10-1	14	LINPYNGGTS	BBBAAALBBB
W	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	100.0	H3	15	H3-15-*	-1	ARDGDYyRYGRYFDY
W	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	100.0	H4	8	H4-8-1	10	VDKSSSTA	BBAAALBB
X	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	16	KASGYSFTGYTMN	BBBLBBAAABBBB
X	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	70.0	H2	10	H2-10-1	14	LINPYNGGTS	BBBAAALBBB
X	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	100.0	H3	15	H3-15-*	-1	ARDGDYyRYGRYFDY
X	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	100.0	H4	8	H4-8-1	10	VDKSSSTA	BBAAALBB
Y	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	16	KASGYSFTGYTMN	BBBLBBAAABBBB
Y	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	70.0	H2	10	H2-10-1	14	LINPYNGGTS	BBBAAALBBB
Y	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	100.0	H3	15	H3-15-*	-1	ARDGDYyRYGRYFDY
Y	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	100.0	H4	8	H4-8-1	10	VDKSSSTA	BBAAALBB
Z	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	85.7	L1	14	L1-14-1	9	RSSTGAVTTiNFAN	BBAAEBBBAAALBB
Z	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	87.5	L2	8	L2-8-4	18	GGINNRAP	BEAABBBB
Z	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	87.5	L3	9	L3-9-4	8	ALWYSNHWV	BBBBEABBB
Z	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L4	6	L4-6-2	33	LIGDKA	BBEABB
f	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	85.7	L1	14	L1-14-1	9	RSSTGAVTTiNFAN	BBAAEBBBAAALBB
f	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	87.5	L2	8	L2-8-4	18	GGINNRAP	BEAABBBB
f	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	87.5	L3	9	L3-9-4	8	ALWYSNHWV	BBBBEABBB
f	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L4	6	L4-6-2	33	LIGDKA	BBEABB
g	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	85.7	L1	14	L1-14-1	9	RSSTGAVTTiNFAN	BBAAEBBBAAALBB
g	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	87.5	L2	8	L2-8-4	18	GGINNRAP	BEAABBBB
g	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	87.5	L3	9	L3-9-4	8	ALWYSNHWV	BBBBEABBB
g	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L4	6	L4-6-2	33	LIGDKA	BBEABB
h	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	85.7	L1	14	L1-14-1	9	RSSTGAVTTiNFAN	BBAAEBBBAAALBB
h	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	87.5	L2	8	L2-8-4	18	GGINNRAP	BEAABBBB
h	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	87.5	L3	9	L3-9-4	8	ALWYSNHWV	BBBBEABBB
h	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L4	6	L4-6-2	33	LIGDKA	BBEABB
i	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	85.7	L1	14	L1-14-1	9	RSSTGAVTTiNFAN	BBAAEBBBAAALBB
i	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	87.5	L2	8	L2-8-4	18	GGINNRAP	BEAABBBB
i	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	87.5	L3	9	L3-9-4	8	ALWYSNHWV	BBBBLABBB
i	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L4	6	L4-6-2	33	LIGDKA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024