PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4RAV

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-30*03	95.9	Hu_IGHV3-30*03	84.6	H1	13	H1-13-1	7	AASGFTFSSYSMS	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-30*03	95.9	Hu_IGHV3-30*03	100.0	H2	10	H2-10-2	9	VISYDGSNKY	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-30*03	95.9	Hu_IGHV3-30*03	100.0	H3	8	H3-8-2	9	ARDRYFDL	BBEAALAB
A	heavy	Homo.sapiens	Hu_IGHV3-30*03	95.9	Hu_IGHV3-30*03	100.0	H4	8	H4-8-1	7	RDNSKNTL	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV2-14*01	94.1	Hu_IGLV2-14*01	85.7	L1	14	L1-14-2	12	TGTSSDIGaYNYVS	BBBAAAAAABAABB
B	lambda	Homo.sapiens	Hu_IGLV2-14*01	94.1	Hu_IGLV2-14*01	87.5	L2	8	L2-8-*	-1	YDVSNRPS	BLEABBBA
B	lambda	Homo.sapiens	Hu_IGLV2-14*01	94.1	Hu_IGLV2-14*01	44.4	L3	9	L3-9-*	-1	SSFANSGPL	BBBBAAEBB
B	lambda	Homo.sapiens	Hu_IGLV2-14*01	94.1	Hu_IGLV2-14*01	83.3	L4	6	L4-6-2	6	KSGDTA	BBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-30*03	95.9	Hu_IGHV3-30*03	84.6	H1	13	H1-13-1	7	AASGFTFSSYSMS	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-30*03	95.9	Hu_IGHV3-30*03	100.0	H2	10	H2-10-2	9	VISYDGSNKY	BBBAALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-30*03	95.9	Hu_IGHV3-30*03	100.0	H3	8	H3-8-2	8	ARDRYFDL	BBEAALAB
C	heavy	Homo.sapiens	Hu_IGHV3-30*03	95.9	Hu_IGHV3-30*03	100.0	H4	8	H4-8-1	7	RDNSKNTL	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV2-14*01	94.1	Hu_IGLV2-14*01	85.7	L1	14	L1-14-2	14	TGTSSDIGaYNYVS	BBBAAAAAABAABB
D	lambda	Homo.sapiens	Hu_IGLV2-14*01	94.1	Hu_IGLV2-14*01	87.5	L2	8	L2-8-*	-1	YDVSNRPS	BLEABBBA
D	lambda	Homo.sapiens	Hu_IGLV2-14*01	94.1	Hu_IGLV2-14*01	44.4	L3	9	L3-9-*	-1	SSFANSGPL	BBBBAAEBB
D	lambda	Homo.sapiens	Hu_IGLV2-14*01	94.1	Hu_IGLV2-14*01	83.3	L4	6	L4-6-2	6	KSGDTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024