PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4R4F

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV4-34*12	88.9	Hu_IGHV4-34*12	69.2	H1	13	H1-13-4	13	GVYGESLSGHYWS	BBBLBBABLBBBB
H	heavy	Homo.sapiens	Hu_IGHV4-34*12	88.9	Hu_IGHV4-34*12	66.7	H2	9	H2-9-1	24	EIKHNGSPN	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-34*12	88.9	Hu_IGHV4-34*12	100.0	H3	13	H3-13-*	-1	ARRSNWPYLPFDP	BBBBBLbBBaBBb
H	heavy	Homo.sapiens	Hu_IGHV4-34*12	88.9	Hu_IGHV4-34*12	75.0	H4	8	H4-8-1	15	LDMSKNQF	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.6	Hu_IGKV1-9*01	100.0	L1	11	L1-11-*	-1	RASQGISSYLA
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.6	Hu_IGKV1-9*01	100.0	L2	8	L2-8-1	6	YAASTLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.6	Hu_IGKV1-9*01	28.6	L3	8	L3-8-*	-1	QHLIGLRS	BBABEALB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.6	Hu_IGKV1-9*01	100.0	L4	6	L4-6-1	8	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024