PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4OKV

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV1-61*01	97.3	Mo_IGHV1-61*01	92.3	H1	13	H1-13-1	10	KASGYTFTSYWMN	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV1-61*01	97.3	Mo_IGHV1-61*01	80.0	H2	10	H2-10-1	7	LIDPSDSETH	BBBAAALBBB
A	heavy	Mus.musculus	Mo_IGHV1-61*01	97.3	Mo_IGHV1-61*01	100.0	H3	6	H3-6-1	7	ARGGTY	BBEAAB
A	heavy	Mus.musculus	Mo_IGHV1-61*01	97.3	Mo_IGHV1-61*01	100.0	H4	8	H4-8-1	11	VDKSSSTA	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV1-135*01	98.6	Mo_IGKV1-135*01	100.0	L1	16	L1-16-1	6	KSSQSLldsdgKTYLN	BBABBABBAALBBBBB
B	kappa	Mus.musculus	Mo_IGKV1-135*01	98.6	Mo_IGKV1-135*01	100.0	L2	8	L2-8-1	9	YLVSKLDS	BLEABBBB
B	kappa	Mus.musculus	Mo_IGKV1-135*01	98.6	Mo_IGKV1-135*01	100.0	L3	9	L3-9-cis7-1	10	WQGTHFPYT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV1-135*01	98.6	Mo_IGKV1-135*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
C	heavy	Mus.musculus	Mo_IGHV1-61*01	97.3	Mo_IGHV1-61*01	92.3	H1	13	H1-13-1	9	KASGYTFTSYWMN	BBBLBBAAABBBB
C	heavy	Mus.musculus	Mo_IGHV1-61*01	97.3	Mo_IGHV1-61*01	80.0	H2	10	H2-10-1	8	LIDPSDSETH	BBBAAALBBB
C	heavy	Mus.musculus	Mo_IGHV1-61*01	97.3	Mo_IGHV1-61*01	100.0	H3	6	H3-6-1	6	ARGGTY	BBEAAB
C	heavy	Mus.musculus	Mo_IGHV1-61*01	97.3	Mo_IGHV1-61*01	100.0	H4	8	H4-8-1	8	VDKSSSTA	BBAAALBB
D	kappa	Mus.musculus	Mo_IGKV1-135*01	98.6	Mo_IGKV1-135*01	100.0	L1	16	L1-16-1	7	KSSQSLldsdgKTYLN	BBABBABBAALBBBBB
D	kappa	Mus.musculus	Mo_IGKV1-135*01	98.6	Mo_IGKV1-135*01	100.0	L2	8	L2-8-1	9	YLVSKLDS	BLEABBBB
D	kappa	Mus.musculus	Mo_IGKV1-135*01	98.6	Mo_IGKV1-135*01	100.0	L3	9	L3-9-cis7-1	9	WQGTHFPYT	BBAABBbBB
D	kappa	Mus.musculus	Mo_IGKV1-135*01	98.6	Mo_IGKV1-135*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024