PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4N8C

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1S137*01	90.4	Mo_IGHV1S137*01	100.0	H1	13	H1-13-1	10	KGSGYTFTDYAMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1S137*01	90.4	Mo_IGHV1S137*01	40.0	H2	10	H2-10-1	12	VIGTDNGNTN	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1S137*01	90.4	Mo_IGHV1S137*01	100.0	H3	12	H3-12-*	-1	ARRDRDDVWFAY	BBBBABBBBBAB
H	heavy	Mus.musculus	Mo_IGHV1S137*01	90.4	Mo_IGHV1S137*01	87.5	H4	8	H4-8-1	7	VDKSSNTA	BBAAALBB
I	heavy	Mus.musculus	Mo_IGHV1S137*01	90.4	Mo_IGHV1S137*01	100.0	H1	13	H1-13-1	11	KGSGYTFTDYAMH	BBBLBBAAABBBB
I	heavy	Mus.musculus	Mo_IGHV1S137*01	90.4	Mo_IGHV1S137*01	40.0	H2	10	H2-10-1	12	VIGTDNGNTN	BBBAAALBBB
I	heavy	Mus.musculus	Mo_IGHV1S137*01	90.4	Mo_IGHV1S137*01	100.0	H3	12	H3-12-*	-1	ARRDRDDVWFAY	BBBBABBBBBAB
I	heavy	Mus.musculus	Mo_IGHV1S137*01	90.4	Mo_IGHV1S137*01	87.5	H4	8	H4-8-1	12	VDKSSNTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV8-30*01	97.1	Mo_IGKV8-30*01	76.5	L1	17	L1-17-1	8	KSSQSLfyssyqKDLLA	BBABBABBAAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV8-30*01	97.1	Mo_IGKV8-30*01	100.0	L2	8	L2-8-1	7	YWASTRES	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV8-30*01	97.1	Mo_IGKV8-30*01	85.7	L3	9	L3-9-cis7-1	8	QQYYTYPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV8-30*01	97.1	Mo_IGKV8-30*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
M	kappa	Mus.musculus	Mo_IGKV8-30*01	97.1	Mo_IGKV8-30*01	76.5	L1	17	L1-17-1	8	KSSQSLfyssyqKDLLA	BBABBABBAAALBBBBB
M	kappa	Mus.musculus	Mo_IGKV8-30*01	97.1	Mo_IGKV8-30*01	100.0	L2	8	L2-8-1	8	YWASTRES	BLLABBBB
M	kappa	Mus.musculus	Mo_IGKV8-30*01	97.1	Mo_IGKV8-30*01	85.7	L3	9	L3-9-cis7-1	7	QQYYTYPLT	BBAABBbBB
M	kappa	Mus.musculus	Mo_IGKV8-30*01	97.1	Mo_IGKV8-30*01	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024