PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4M61

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV8-27*01	100.0	Mo_IGKV8-27*01	100.0	L1	17	L1-17-1	6	KSSQSVlyssnqKNYLA	BBABBABBAAALBBBBB
A	kappa	Mus.musculus	Mo_IGKV8-27*01	100.0	Mo_IGKV8-27*01	100.0	L2	8	L2-8-1	6	YWASTRES	BLLABBBB
A	kappa	Mus.musculus	Mo_IGKV8-27*01	100.0	Mo_IGKV8-27*01	83.3	L3	8	L3-8-1	9	HQHLSSWT	BBAABEBB
A	kappa	Mus.musculus	Mo_IGKV8-27*01	100.0	Mo_IGKV8-27*01	100.0	L4	6	L4-6-1	3	GSGTDF	EBEABB
B	heavy	Mus.musculus	Mo_IGHV1-39*01	93.2	Mo_IGHV1-39*01	92.3	H1	13	H1-13-1	7	KASGYSFTGYNMN	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV1-39*01	93.2	Mo_IGHV1-39*01	70.0	H2	10	H2-10-1	8	KINPYYGSTS	BBBAAALBBB
B	heavy	Mus.musculus	Mo_IGHV1-39*01	93.2	Mo_IGHV1-39*01	100.0	H3	13	H3-13-*	-1	ARGRLRRGGYFDY	BBBBAAALLBBAB
B	heavy	Mus.musculus	Mo_IGHV1-39*01	93.2	Mo_IGHV1-39*01	87.5	H4	8	H4-8-1	26	VDKSSSTA	BBBAALBB
C	kappa	Mus.musculus	Mo_IGKV8-27*01	100.0	Mo_IGKV8-27*01	100.0	L1	17	L1-17-1	7	KSSQSVlyssnqKNYLA	BBABBABBAAALBBBBB
C	kappa	Mus.musculus	Mo_IGKV8-27*01	100.0	Mo_IGKV8-27*01	100.0	L2	8	L2-8-1	7	YWASTRES	BLLABBBB
C	kappa	Mus.musculus	Mo_IGKV8-27*01	100.0	Mo_IGKV8-27*01	83.3	L3	8	L3-8-1	11	HQHLSSWT	BBAABEBB
C	kappa	Mus.musculus	Mo_IGKV8-27*01	100.0	Mo_IGKV8-27*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB
D	heavy	Mus.musculus	Mo_IGHV1-39*01	93.2	Mo_IGHV1-39*01	92.3	H1	13	H1-13-1	7	KASGYSFTGYNMN	BBBLBBAAABBBB
D	heavy	Mus.musculus	Mo_IGHV1-39*01	93.2	Mo_IGHV1-39*01	70.0	H2	10	H2-10-1	7	KINPYYGSTS	BBBAAALBBB
D	heavy	Mus.musculus	Mo_IGHV1-39*01	93.2	Mo_IGHV1-39*01	100.0	H3	13	H3-13-*	-1	ARGRLRRGGYFDY	BBBBAAALLBBAB
D	heavy	Mus.musculus	Mo_IGHV1-39*01	93.2	Mo_IGHV1-39*01	87.5	H4	8	H4-8-1	7	VDKSSSTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024