PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4KXZ

#CDRs = 8; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	76.9	H1	13	H1-13-*	-1	KASGYTFSSNVIS	BBBEBAAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	70.0	H2	10	H2-10-3	13	GVIPIVDIAN	BBBBEALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	50.0	H3	13	H3-13-*	-1	ASTLGLVLDAMDY	BBBAEBABBBBAB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	75.0	H4	8	H4-8-1	14	ADESTSTT	BBAAALBB
I	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	83.3	L1	12	L1-12-*	-1	RASQSLgSSYLA	BBABBAEAAABB
I	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	5	YGASSRAP	BLLABBBB
I	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	71.4	L3	9	L3-9-cis7-1	7	QQYADSPIT	BBAABBbBB
I	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
J	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	76.9	H1	13	H1-13-*	-1	KASGYTFSSNVIS	BBBEAAAAABBBB
J	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	70.0	H2	10	H2-10-1	14	GVIPIVDIAN	BBBAAALBBB
J	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	50.0	H3	13	H3-13-*	-1	ASTLGLVLDAMDY	BBBAEBABBBBAB
J	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	75.0	H4	8	H4-8-1	22	ADESTSTT	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	83.3	L1	12	L1-12-*	-1	RASQSLgSSYLA	BBABBAEAAABB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	6	YGASSRAP	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	71.4	L3	9	L3-9-cis7-1	7	QQYADSPIT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB
M	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	83.3	L1	12	L1-12-*	-1	RASQSLgSSYLA	BBABBAEAAABB
M	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	7	YGASSRAP	BLLABBBB
M	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	71.4	L3	9	L3-9-cis7-1	7	QQYADSPIT	BBAABBbBB
M	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB
N	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	76.9	H1	13	H1-13-3	20	KASGYTFSSNVIS	BBBEAAAAABBBB
N	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	70.0	H2	10	H2-10-1	17	GVIPIVDIAN	BBBAAALBBB
N	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	50.0	H3	13	H3-13-*	-1	ASTLGLVLDAMDY	BBBAEBABBBBAB
N	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	75.0	H4	8	H4-8-1	10	ADESTSTT	BBAAALBB
P	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	83.3	L1	12	L1-12-*	-1	RASQSLgSSYLA	BBABBAEAAABB
P	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	6	YGASSRAP	BLLABBBB
P	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	71.4	L3	9	L3-9-cis7-1	8	QQYADSPIT	BBAABBbBB
P	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB
Q	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	76.9	H1	13	H1-13-*	-1	KASGYTFSSNVIS	BBAELAAAABBBB
Q	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	70.0	H2	10	H2-10-1	15	GVIPIVDIAN	BBBAAALBBB
Q	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	50.0	H3	13	H3-13-*	-1	ASTLGLVLDAMDY	BBBAEBABBBBAB
Q	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	75.0	H4	8	H4-8-1	16	ADESTSTT	BBAAALBB

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