PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4JN1

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Hu_IGHV4-61*08	91.8	Mo_IGHV2-9*01	92.3	H1	13	H1-13-*	-1	TVSGFSLTSYIVD	BBBLBAABBBBBB
H	heavy	Mus.musculus	Hu_IGHV4-61*08	91.8	Mo_IGHV2-9*01	77.8	H2	9	H2-9-1	10	VIWAGGSTG	BBBAALBBB
H	heavy	Mus.musculus	Hu_IGHV4-61*08	91.8	Hu_IGHV4-61*08	50.0	H3	16	H3-16-*	-1	ASAAYYSYynYDGFAY
H	heavy	Mus.musculus	Hu_IGHV4-61*08	91.8	Hu_IGHV4-61*08	87.5	H4	8	H4-8-*	-1	KDTSKNQF	BBABBLBB
L	kappa	Mus.musculus	Hu_IGKV2D-30*01	98.6	Mo_IGKV1-133*01	81.2	L1	16	L1-16-1	4	KSSQSLlytdgKTYLY	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Hu_IGKV2D-30*01	98.6	Mo_IGKV1-133*01	100.0	L2	8	L2-8-1	5	YLVSKLDS	BLEABBBB
L	kappa	Mus.musculus	Hu_IGKV2D-30*01	98.6	Hu_IGKV2D-30*01	57.1	L3	9	L3-9-cis7-1	11	LQSTHFPHT	BBAABBbBB
L	kappa	Mus.musculus	Hu_IGKV2D-30*01	98.6	Hu_IGKV2D-30*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024