PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4JB9

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV1-18*03	60.0	Ra_IGHV1-38*01	53.8	H1	13	H1-13-1	11	ATSGYNFRDFSIH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-18*03	60.0	Ra_IGHV1-38*01	40.0	H2	10	H2-10-1	13	WIKPMWGAVN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-18*03	60.0	Hu_IGHV1-18*03	50.0	H3	17	H3-17-*	-1	VRRGSSCphcGDFHFEH
H	heavy	Homo.sapiens	Hu_IGHV1-18*03	60.0	Hu_IGHV1-18*03	0.0	H4	15	H4-15-*	-1	RLFSQDlyypdrgTA
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	81.2	Ra_IGKV4S10*01	40.0	L1	10	L1-10-*	-1	RASQGGNSLN	BBABBLBBBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	81.2	Ra_IGKV4S10*01	75.0	L2	8	L2-8-*	-1	YDTSRRAS	BLEBBBBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	81.2	Hu_IGKV3D-20*02	0.0	L3	5	L3-5-1	9	QQFEF	BBEAB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	81.2	Hu_IGKV3D-20*02	100.0	L4	6	L4-6-1	15	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024