PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4HZL

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV5-9-1*01	93.2	Mo_IGHV5-9-1*01	84.6	H1	13	H1-13-1	11	AASGFTVSTYAMS	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV5-9-1*01	93.2	Mo_IGHV5-9-1*01	100.0	H2	10	H2-10-2	10	TISSGGSYTY	BBBAALABBB
A	heavy	Mus.musculus	Mo_IGHV5-9-1*01	93.2	Mo_IGHV5-9-1*01	100.0	H3	15	H3-15-*	-1	ARHPPTvVAGDAMDY
A	heavy	Mus.musculus	Mo_IGHV5-9-1*01	93.2	Mo_IGHV5-9-1*01	87.5	H4	8	H4-8-1	9	RDIAKNTL	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV1-117*01	98.6	Mo_IGKV1-117*01	87.5	L1	16	L1-16-1	14	RSSQSLvhsdgNTYLE	BBABBABBAALBBBBB
B	kappa	Mus.musculus	Mo_IGKV1-117*01	98.6	Mo_IGKV1-117*01	87.5	L2	8	L2-8-*	-1	YKLSNRFS	BLEABBBB
B	kappa	Mus.musculus	Mo_IGKV1-117*01	98.6	Mo_IGKV1-117*01	100.0	L3	9	L3-9-2	17	FQGSHVPPT	BBAABABBB
B	kappa	Mus.musculus	Mo_IGKV1-117*01	98.6	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	15	GSGTDF	EBEABB
H	heavy	Mus.musculus	Mo_IGHV5-9-1*01	93.2	Mo_IGHV5-9-1*01	84.6	H1	13	H1-13-1	13	AASGFTVSTYAMS	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV5-9-1*01	93.2	Mo_IGHV5-9-1*01	100.0	H2	10	H2-10-2	10	TISSGGSYTY	BBBAALABBB
H	heavy	Mus.musculus	Mo_IGHV5-9-1*01	93.2	Mo_IGHV5-9-1*01	100.0	H3	15	H3-15-*	-1	ARHPPTvVAGDAMDY
H	heavy	Mus.musculus	Mo_IGHV5-9-1*01	93.2	Mo_IGHV5-9-1*01	87.5	H4	8	H4-8-1	8	RDIAKNTL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	98.6	Mo_IGKV1-117*01	87.5	L1	16	L1-16-1	14	RSSQSLvhsdgNTYLE	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	98.6	Mo_IGKV1-117*01	87.5	L2	8	L2-8-1	20	YKLSNRFS	BLEBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	98.6	Mo_IGKV1-117*01	100.0	L3	9	L3-9-2	17	FQGSHVPPT	BBAABABBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	98.6	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024