PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4HG4

#CDRs = 8; #Clusters = 11.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
J	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	53.8	H1	13	H1-13-*	-1	KASGGTFITHVFT	BBBLBBABELBBB
J	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	70.0	H2	10	H2-10-1	16	GFIAIFGTSN	BBBAAALBBB
J	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	100.0	H3	13	H3-13-*	-1	ARGISGSYGWFDP	BBBBLEALBBBAB
J	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	100.0	H4	8	H4-8-1	20	ADESTSTA	BBAAALBB
K	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	12	QASQDIRKYLN	BBABBAEABBB
K	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	75.0	L2	8	L2-8-*	-1	YDASNVKT	BLLLBBBB
K	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L3	9	L3-9-*	-1	QQYDNlPIT	BBBEBAALB
K	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L4	6	L4-6-3	35	GSGTDF	EABABB
L	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	53.8	H1	13	H1-13-1	25	KASGGTFITHVFT	BBBLBBAAABBBB
L	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	70.0	H2	10	H2-10-1	13	GFIAIFGTSN	BBBAAALBBB
L	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	100.0	H3	13	H3-13-*	-1	ARGISGSYGWFDP	BBBBEAALBBBBb
L	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	100.0	H4	8	H4-8-1	17	ADESTSTA	BBAAALBB
M	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	11	QASQDIRKYLN	BBABBAEABBB
M	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	75.0	L2	8	L2-8-1	12	YDASNVKT	BLEABBBB
M	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L3	9	L3-9-cis7-*	-1	QQYDNlPIT	BBBEBBAEB
M	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L4	6	L4-6-3	24	GSGTDF	EAAABB
N	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	53.8	H1	13	H1-13-1	20	KASGGTFITHVFT	BBBLBBAAABBBB
N	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	70.0	H2	10	H2-10-1	16	GFIAIFGTSN	EBBAAALBBB
N	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	100.0	H3	13	H3-13-*	-1	ARGISGSYGWFDP	BBBBEAAEBBBBb
N	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	100.0	H4	8	H4-8-1	13	ADESTSTA	BBAAALBB
O	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	11	QASQDIRKYLN	BBABBAEABBB
O	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	75.0	L2	8	L2-8-1	12	YDASNVKT	BLLABBBB
O	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L3	9	L3-9-*	-1	QQYDNlPIT	BBBEBBAEB
O	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L4	6	L4-6-3	29	GSGTDF	EAAABB
P	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	53.8	H1	13	H1-13-1	21	KASGGTFITHVFT	BBBLBBAAABBBB
P	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	70.0	H2	10	H2-10-1	12	GFIAIFGTSN	BBBAAALBBB
P	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	100.0	H3	13	H3-13-*	-1	ARGISGSYGWFDP	BBBBEAALBBBAB
P	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	100.0	H4	8	H4-8-1	19	ADESTSTA	BBAAALBB
Q	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	13	QASQDIRKYLN	BBABBAEAABB
Q	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	75.0	L2	8	L2-8-1	15	YDASNVKT	BLLABBBB
Q	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L3	9	L3-9-*	-1	QQYDNlPIT	BBBEBBALB
Q	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L4	6	L4-6-3	23	GSGTDF	EAAABB
R	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	53.8	H1	13	H1-13-1	22	KASGGTFITHVFT	BBBLBBAAABBBB
R	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	70.0	H2	10	H2-10-1	14	GFIAIFGTSN	BBBAAALBBB
R	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	100.0	H3	13	H3-13-*	-1	ARGISGSYGWFDP	BBBBEAAEABBAB
R	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	100.0	H4	8	H4-8-1	20	ADESTSTA	BBAAALBB
S	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	10	QASQDIRKYLN	BBABBAEABBB
S	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	75.0	L2	8	L2-8-1	12	YDASNVKT	BLEABBBB
S	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L3	9	L3-9-*	-1	QQYDNlPIT	BBBEBBALB
S	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L4	6	L4-6-3	20	GSGTDF	EAAABB
T	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	53.8	H1	13	H1-13-*	-1	KASGGTFITHVFT	BBBLBBAAABBBB
T	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	70.0	H2	10	H2-10-1	12	GFIAIFGTSN	BBBAAALBBB
T	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	100.0	H3	13	H3-13-*	-1	ARGISGSYGWFDP	BBBBEAAEBBBAB
T	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	100.0	H4	8	H4-8-1	16	ADESTSTA	BBAAALBB
U	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	11	QASQDIRKYLN	BBABBAEABBB
U	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	75.0	L2	8	L2-8-1	12	YDASNVKT	BLEABBBB
U	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L3	9	L3-9-*	-1	QQYDNlPIT	BBBEBBAEB
U	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L4	6	L4-6-3	23	GSGTDF	EAAABB
V	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	53.8	H1	13	H1-13-*	-1	KASGGTFITHVFT	BBBLBBAAABBBB
V	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	70.0	H2	10	H2-10-1	14	GFIAIFGTSN	BBBAAALBBB
V	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	100.0	H3	13	H3-13-*	-1	ARGISGSYGWFDP	BBBBEAALABBAB
V	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	100.0	H4	8	H4-8-1	19	ADESTSTA	BBAAALBB
W	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	11	QASQDIRKYLN	BBABBAEABBB
W	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	75.0	L2	8	L2-8-1	16	YDASNVKT	BLEABBBB
W	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L3	9	L3-9-*	-1	QQYDNlPIT	BBBEBBALB
W	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L4	6	L4-6-3	22	GSGTDF	EAAABB
X	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	53.8	H1	13	H1-13-*	-1	KASGGTFITHVFT	BBBEBBAAABBBB
X	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	70.0	H2	10	H2-10-1	11	GFIAIFGTSN	BBBAAALBBB
X	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	100.0	H3	13	H3-13-*	-1	ARGISGSYGWFDP	BBBBEAALBBBAB
X	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	100.0	H4	8	H4-8-1	12	ADESTSTA	BBAAALBB
Y	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	9	QASQDIRKYLN	BBABBAEAABB
Y	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	75.0	L2	8	L2-8-1	14	YDASNVKT	BLEABBBB
Y	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L3	9	L3-9-*	-1	QQYDNlPIT	BBBEBBALB
Y	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L4	6	L4-6-3	23	GSGTDF	EAAABB
Z	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	53.8	H1	13	H1-13-*	-1	KASGGTFITHVFT	BBBEBBAAABBBB
Z	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	70.0	H2	10	H2-10-1	12	GFIAIFGTSN	BBBAAALBBB
Z	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	100.0	H3	13	H3-13-*	-1	ARGISGSYGWFDP	BBBBEAALABBAB
Z	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	100.0	H4	8	H4-8-1	11	ADESTSTA	BBAAALBB
z	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	10	QASQDIRKYLN	BBABBAEABBB
z	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	75.0	L2	8	L2-8-1	19	YDASNVKT	BLLABBBB
z	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L3	9	L3-9-*	-1	QQYDNlPIT	BBBEBBAEB
z	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L4	6	L4-6-3	22	GSGTDF	EAAABB

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