PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4HC1

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV3-6*01	95.8	Mo_IGHV3-6*01	100.0	H1	14	H1-14-1	8	SVTGYSITSgYYWN	BBBLBBAAAEEBBB
H	heavy	Mus.musculus	Mo_IGHV3-6*01	95.8	Mo_IGHV3-6*01	100.0	H2	9	H2-9-1	11	YISYDGSNN	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV3-6*01	95.8	Mo_IGHV3-6*01	100.0	H3	11	H3-11-*	-1	ARASDSDGFAY	BBBBAAALLAB
H	heavy	Mus.musculus	Mo_IGHV3-6*01	95.8	Mo_IGHV3-6*01	87.5	H4	8	H4-8-1	12	RDTSKNHF	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV14-100*01	95.7	Mo_IGKV14-100*01	81.8	L1	11	L1-11-2	7	HASQGIGRNIG	BBABBALLBBB
L	kappa	Mus.musculus	Mo_IGKV14-100*01	95.7	Mo_IGKV14-100*01	87.5	L2	8	L2-8-1	9	YHGTNLKD	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV14-100*01	95.7	Mo_IGKV14-100*01	71.4	L3	9	L3-9-cis7-1	9	IQYVQFPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV14-100*01	95.7	Mo_IGKV14-100*01	100.0	L4	6	L4-6-1	9	GSGADY	EBEABB
M	heavy	Mus.musculus	Mo_IGHV3-6*01	95.8	Mo_IGHV3-6*01	100.0	H1	14	H1-14-1	8	SVTGYSITSgYYWN	BBBLBBAAAEEBBB
M	heavy	Mus.musculus	Mo_IGHV3-6*01	95.8	Mo_IGHV3-6*01	100.0	H2	9	H2-9-1	11	YISYDGSNN	BBBAALBBB
M	heavy	Mus.musculus	Mo_IGHV3-6*01	95.8	Mo_IGHV3-6*01	100.0	H3	11	H3-11-*	-1	ARASDSDGFAY	BBBBAAALLAB
M	heavy	Mus.musculus	Mo_IGHV3-6*01	95.8	Mo_IGHV3-6*01	87.5	H4	8	H4-8-1	12	RDTSKNHF	BBAAALBB
N	kappa	Mus.musculus	Mo_IGKV14-100*01	95.7	Mo_IGKV14-100*01	81.8	L1	11	L1-11-2	7	HASQGIGRNIG	BBABBALLBBB
N	kappa	Mus.musculus	Mo_IGKV14-100*01	95.7	Mo_IGKV14-100*01	87.5	L2	8	L2-8-1	9	YHGTNLKD	BLLABBBB
N	kappa	Mus.musculus	Mo_IGKV14-100*01	95.7	Mo_IGKV14-100*01	71.4	L3	9	L3-9-cis7-1	9	IQYVQFPYT	BBAABBbBB
N	kappa	Mus.musculus	Mo_IGKV14-100*01	95.7	Mo_IGKV14-100*01	100.0	L4	6	L4-6-1	9	GSGADY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024