PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3NZH

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens.Mus.musculus	Mo_IGHV6-3*01	98.6	Mo_IGHV6-3*01	100.0	H1	13	H1-13-1	8	VASGFTFSNYWMN	BBBLBBAAABBBB
H	heavy	Homo.sapiens.Mus.musculus	Mo_IGHV6-3*01	98.6	Mo_IGHV6-3*01	91.7	H2	12	H2-12-1	15	QIRlkSYNYATH	BBBBAAALLBBB
H	heavy	Homo.sapiens.Mus.musculus	Mo_IGHV6-3*01	98.6	Mo_IGHV6-3*01	100.0	H3	7	H3-7-*	-1	TPDGSDY	BBBLLAB
H	heavy	Homo.sapiens.Mus.musculus	Mo_IGHV6-3*01	98.6	Mo_IGHV6-3*01	100.0	H4	8	H4-8-1	8	RDDSKSSV	BBAAALBB
L	kappa	Homo.sapiens.Mus.musculus	Mo_IGKV6-32*01	100.0	Mo_IGKV6-32*01	100.0	L1	11	L1-11-1	7	KASQSVSNDVA	BBABBAEABBB
L	kappa	Homo.sapiens.Mus.musculus	Mo_IGKV6-32*01	100.0	Mo_IGKV6-32*01	100.0	L2	8	L2-8-1	8	YYASNRYT	BLLABBBB
L	kappa	Homo.sapiens.Mus.musculus	Mo_IGKV6-32*01	100.0	Mo_IGKV6-32*01	100.0	L3	9	L3-9-cis7-1	13	QQDYSSPYT	BBAABBbBB
L	kappa	Homo.sapiens.Mus.musculus	Mo_IGKV6-32*01	100.0	Mo_IGKV6-32*01	100.0	L4	6	L4-6-1	10	GYGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024