PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3K1K

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Camelus.dromedarius	Ca_IGHV1S51*01_VHH	87.7	Ca_IGHV1S51*01_VHH	46.2	H1	13	H1-13-1	13	AASGFPVNRYSMR	BBBLBBAAABBBB
C	heavy	Camelus.dromedarius	Ca_IGHV1S51*01_VHH	87.7	CDRLenMismatch	-1.0	H2	10	H2-10-2	11	GMSSAGDRSS	BBBAALABBB
C	heavy	Camelus.dromedarius	Ca_IGHV1S51*01_VHH	87.7	Ca_IGHV1S51*01_VHH	0.0	H3	8	H3-8-*	-1	NVNVGFEY	BBBBEBBB
C	heavy	Camelus.dromedarius	Ca_IGHV1S51*01_VHH	87.7	Ca_IGHV1S51*01_VHH	62.5	H4	8	H4-8-1	8	RDDARNTV	BBAAALBB
D	heavy	Camelus.dromedarius	Ca_IGHV1S51*01_VHH	87.7	Ca_IGHV1S51*01_VHH	46.2	H1	13	H1-13-1	14	AASGFPVNRYSMR	BBBLBBAAABBBB
D	heavy	Camelus.dromedarius	Ca_IGHV1S51*01_VHH	87.7	CDRLenMismatch	-1.0	H2	10	H2-10-2	13	GMSSAGDRSS	BBBAALABBB
D	heavy	Camelus.dromedarius	Ca_IGHV1S51*01_VHH	87.7	Ca_IGHV1S51*01_VHH	0.0	H3	8	H3-8-*	-1	NVNVGFEY	BBBBEBBB
D	heavy	Camelus.dromedarius	Ca_IGHV1S51*01_VHH	87.7	Ca_IGHV1S51*01_VHH	62.5	H4	8	H4-8-1	4	RDDARNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024