PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3IDY

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV3-30*09	97.3	Hu_IGHV3-30*09	84.6	H1	13	H1-13-1	14	AASGFTFRNYAMH	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-30*09	97.3	Hu_IGHV3-30*09	70.0	H2	10	H2-10-2	21	LIKYDGRNKY	BBBAALABBB
B	heavy	Homo.sapiens	Hu_IGHV3-30*09	97.3	Hu_IGHV3-30*09	100.0	H3	21	H3-21-*	-1	ARDIGLKgehydilTAYGPDY
B	heavy	Homo.sapiens	Hu_IGHV3-30*09	97.3	Hu_IGHV3-30*09	100.0	H4	8	H4-8-1	14	RDNSKNTL	BBAAALBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	90.9	L1	11	L1-11-1	9	QASQDIRNYLN	BBABBAEABBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	87.5	L2	8	L2-8-1	15	YDASNSET	BLEABBBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	57.1	L3	10	L3-10-*	-1	QQHQNVplTT	BBAABBbBBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	83.3	L4	6	L4-6-1	10	GSGRDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-30*09	97.3	Hu_IGHV3-30*09	84.6	H1	13	H1-13-1	14	AASGFTFRNYAMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*09	97.3	Hu_IGHV3-30*09	70.0	H2	10	H2-10-2	21	LIKYDGRNKY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*09	97.3	Hu_IGHV3-30*09	100.0	H3	21	H3-21-*	-1	ARDIGLKgehydilTAYGPDY
H	heavy	Homo.sapiens	Hu_IGHV3-30*09	97.3	Hu_IGHV3-30*09	100.0	H4	8	H4-8-1	14	RDNSKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	90.9	L1	11	L1-11-1	9	QASQDIRNYLN	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	87.5	L2	8	L2-8-1	15	YDASNSET	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	57.1	L3	10	L3-10-*	-1	QQHQNVplTT	BBAABBbBBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	83.3	L4	6	L4-6-1	9	GSGRDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024