PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3HI1

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	91.7	L1	12	L1-12-1	11	RASQSVSSrYLA	BBABBBBAAABB
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	6	YGASSRAT	BLEABBBB
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	57.1	L3	9	L3-9-1	12	QQYDNSVCT	BBBBLLBBB
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
B	heavy	Homo.sapiens	Hu_IGHV4-59*11	90.4	Hu_IGHV4-59*11	100.0	H1	13	H1-13-4	19	TVSGGSISSHYWS	BBBLBBABLBBBB
B	heavy	Homo.sapiens	Hu_IGHV4-59*11	90.4	Hu_IGHV4-59*11	100.0	H2	9	H2-9-1	18	YIYYSGSTN	BBBAALBBB
B	heavy	Homo.sapiens	Hu_IGHV4-59*11	90.4	Hu_IGHV4-59*11	100.0	H3	17	H3-17-*	-1	ARGPVpavFYGDYRLDP
B	heavy	Homo.sapiens	Hu_IGHV4-59*11	90.4	Hu_IGHV4-59*11	75.0	H4	8	H4-8-1	12	VETAKNQF	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	90.4	Hu_IGHV4-59*11	100.0	H1	13	H1-13-4	19	TVSGGSISSHYWS	BBBLBBABLBBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	90.4	Hu_IGHV4-59*11	100.0	H2	9	H2-9-1	18	YIYYSGSTN	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	90.4	Hu_IGHV4-59*11	100.0	H3	17	H3-17-*	-1	ARGPVpavFYGDYRLDP
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	90.4	Hu_IGHV4-59*11	75.0	H4	8	H4-8-1	12	VETAKNQF	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	91.7	L1	12	L1-12-1	11	RASQSVSSrYLA	BBABBBBAAABB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	6	YGASSRAT	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	57.1	L3	9	L3-9-1	12	QQYDNSVCT	BBBBLLBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024