PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2R6P

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence
D	heavy	Mus.musculus	Mo_IGHV14-3*02	97.3	Mo_IGHV14-3*02	100.0	H1	13	H1-13-*	-1	TASGFNIKDTYMH
D	heavy	Mus.musculus	Mo_IGHV14-3*02	97.3	Mo_IGHV14-3*02	80.0	H2	10	H2-10-*	-1	RIDPANGYSK
D	heavy	Mus.musculus	Mo_IGHV14-3*02	97.3	Mo_IGHV14-3*02	100.0	H3	9	H3-9-*	-1	ARDYEGFAY
D	heavy	Mus.musculus	Mo_IGHV14-3*02	97.3	Mo_IGHV14-3*02	87.5	H4	8	H4-8-*	-1	ADTSSNAA
E	kappa	Mus.musculus	Mo_IGKV3-5*01	98.6	Mo_IGKV3-5*01	86.7	L1	15	L1-15-*	-1	RASESVvrygNSFMH
E	kappa	Mus.musculus	Mo_IGKV3-5*01	98.6	Mo_IGKV3-5*01	87.5	L2	8	L2-8-*	-1	YRASSLES
E	kappa	Mus.musculus	Mo_IGKV3-5*01	98.6	Mo_IGKV3-5*01	71.4	L3	9	L3-9-*	-1	QQTNVDPWA
E	kappa	Mus.musculus	Mo_IGKV3-5*01	98.6	Mo_IGKV3-5*01	100.0	L4	6	L4-6-*	-1	GSRTDF
F	heavy	Mus.musculus	Mo_IGHV14-3*02	97.3	Mo_IGHV14-3*02	100.0	H1	13	H1-13-*	-1	TASGFNIKDTYMH
F	heavy	Mus.musculus	Mo_IGHV14-3*02	97.3	Mo_IGHV14-3*02	80.0	H2	10	H2-10-*	-1	RIDPANGYSK
F	heavy	Mus.musculus	Mo_IGHV14-3*02	97.3	Mo_IGHV14-3*02	100.0	H3	9	H3-9-*	-1	ARDYEGFAY
F	heavy	Mus.musculus	Mo_IGHV14-3*02	97.3	Mo_IGHV14-3*02	87.5	H4	8	H4-8-*	-1	ADTSSNAA
G	kappa	Mus.musculus	Mo_IGKV3-5*01	98.6	Mo_IGKV3-5*01	86.7	L1	15	L1-15-*	-1	RASESVvrygNSFMH
G	kappa	Mus.musculus	Mo_IGKV3-5*01	98.6	Mo_IGKV3-5*01	87.5	L2	8	L2-8-*	-1	YRASSLES
G	kappa	Mus.musculus	Mo_IGKV3-5*01	98.6	Mo_IGKV3-5*01	71.4	L3	9	L3-9-*	-1	QQTNVDPWA
G	kappa	Mus.musculus	Mo_IGKV3-5*01	98.6	Mo_IGKV3-5*01	100.0	L4	6	L4-6-*	-1	GSRTDF

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024