PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1ZEA

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV9-3*01	94.5	Mo_IGHV9-3*01	100.0	H1	13	H1-13-1	8	KASGYTFTTYGMS	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV9-3*01	94.5	Mo_IGHV9-3*01	100.0	H2	10	H2-10-1	14	WINTYSGVPT	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV9-3*01	94.5	Mo_IGHV9-3*01	100.0	H3	9	H3-9-2	17	ARRSWYFDV	BBBAABBAB
H	heavy	Mus.musculus	Mo_IGHV9-3*01	94.5	Mo_IGHV9-3*01	100.0	H4	8	H4-8-1	8	LETSASTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	81.2	L1	16	L1-16-1	8	KSSQSIvhssgNTYFE	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L2	8	L2-8-1	7	YKVSNRFS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	85.7	L3	9	L3-9-cis7-1	10	FQGSHIPFT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024