PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1UYW

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1S113*01	85.0	Mo_IGHV1S113*01	92.3	H1	13	H1-13-1	5	KTSGYTFTEYTIH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1S113*01	85.0	Mo_IGHV1S113*01	70.0	H2	10	H2-10-1	5	GIDPNSGGTN	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1S113*01	85.0	Mo_IGHV1S113*01	0.0	H3	12	H3-12-*	-1	ARIYHYDGYFDV	BBBBEAALBBAB
H	heavy	Mus.musculus	Mo_IGHV1S113*01	85.0	Mo_IGHV1S113*01	100.0	H4	8	H4-8-1	7	VDKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV6-20*01	98.6	Mo_IGKV6-20*01	90.9	L1	11	L1-11-1	7	KASENVVTYVS	BBABBAEAABB
L	kappa	Mus.musculus	Mo_IGKV6-20*01	98.6	Mo_IGKV6-20*01	100.0	L2	8	L2-8-1	8	YGASNRYT	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV6-20*01	98.6	Mo_IGKV6-20*01	85.7	L3	9	L3-9-cis7-1	9	GQGYSYPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV6-20*01	98.6	Mo_IGKV6-20*01	100.0	L4	6	L4-6-1	6	GSATDF	EBEABB
M	heavy	Mus.musculus	Mo_IGHV1S113*01	85.0	Mo_IGHV1S113*01	92.3	H1	13	H1-13-1	5	KTSGYTFTEYTIH	BBBLBBAAABBBB
M	heavy	Mus.musculus	Mo_IGHV1S113*01	85.0	Mo_IGHV1S113*01	70.0	H2	10	H2-10-1	5	GIDPNSGGTN	BBBAAALBBB
M	heavy	Mus.musculus	Mo_IGHV1S113*01	85.0	Mo_IGHV1S113*01	0.0	H3	12	H3-12-*	-1	ARIYHYDGYFDV	BBBBEAALBBAB
M	heavy	Mus.musculus	Mo_IGHV1S113*01	85.0	Mo_IGHV1S113*01	100.0	H4	8	H4-8-1	6	VDKSSSTA	BBAAALBB
N	kappa	Mus.musculus	Mo_IGKV6-20*01	98.6	Mo_IGKV6-20*01	90.9	L1	11	L1-11-1	9	KASENVVTYVS	BBABBAEAABB
N	kappa	Mus.musculus	Mo_IGKV6-20*01	98.6	Mo_IGKV6-20*01	100.0	L2	8	L2-8-1	8	YGASNRYT	BLLABBBB
N	kappa	Mus.musculus	Mo_IGKV6-20*01	98.6	Mo_IGKV6-20*01	85.7	L3	9	L3-9-cis7-1	8	GQGYSYPYT	BBAABBbBB
N	kappa	Mus.musculus	Mo_IGKV6-20*01	98.6	Mo_IGKV6-20*01	100.0	L4	6	L4-6-1	8	GSATDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024