PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1UWG

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1S135*01	90.4	Mo_IGHV1S135*01	69.2	H1	13	H1-13-*	-1	KASAYSITDFNIY	BBAABBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1S135*01	90.4	Mo_IGHV1S135*01	60.0	H2	10	H2-10-*	-1	GIDPHNGGPV	BBBAAEBEBB
H	heavy	Mus.musculus	Mo_IGHV1S135*01	90.4	Mo_IGHV1S135*01	50.0	H3	10	H3-10-*	-1	AIFYGNFFDY	BBBBEAABBB
H	heavy	Mus.musculus	Mo_IGHV1S135*01	90.4	Mo_IGHV1S135*01	100.0	H4	8	H4-8-1	9	VDKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV6-15*01	91.2	Mo_IGKV6-15*01	90.9	L1	11	L1-11-1	15	KASQNVGTHVA	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV6-15*01	91.2	Mo_IGKV6-15*01	100.0	L2	8	L2-8-1	9	YSASYRYS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV6-15*01	91.2	Mo_IGKV6-15*01	71.4	L3	9	L3-9-cis7-1	10	QQYNLFPVT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV6-15*01	91.2	Mo_IGKV6-15*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
X	kappa	Mus.musculus	Mo_IGKV6-15*01	91.2	Mo_IGKV6-15*01	90.9	L1	11	L1-11-1	16	KASQNVGTHVA	BBABBAEABBB
X	kappa	Mus.musculus	Mo_IGKV6-15*01	91.2	Mo_IGKV6-15*01	100.0	L2	8	L2-8-1	11	YSASYRYS	BLEABBBB
X	kappa	Mus.musculus	Mo_IGKV6-15*01	91.2	Mo_IGKV6-15*01	71.4	L3	9	L3-9-cis7-1	10	QQYNLFPVT	BBAABBbBB
X	kappa	Mus.musculus	Mo_IGKV6-15*01	91.2	Mo_IGKV6-15*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
Y	heavy	Mus.musculus	Mo_IGHV1S135*01	90.4	Mo_IGHV1S135*01	69.2	H1	13	H1-13-*	-1	KASAYSITDFNIY	BBAABBAAABBBB
Y	heavy	Mus.musculus	Mo_IGHV1S135*01	90.4	Mo_IGHV1S135*01	60.0	H2	10	H2-10-*	-1	GIDPHNGGPV	BBBAAEBEBB
Y	heavy	Mus.musculus	Mo_IGHV1S135*01	90.4	Mo_IGHV1S135*01	50.0	H3	10	H3-10-*	-1	AIFYGNFFDY	BBBBEAABBB
Y	heavy	Mus.musculus	Mo_IGHV1S135*01	90.4	Mo_IGHV1S135*01	100.0	H4	8	H4-8-1	7	VDKSSSTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024