PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1P4B

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV2-6-7*01	88.9	Mo_IGHV2-6-7*01	92.3	H1	13	H1-13-1	14	TVSGFSLTDYGVN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV2-6-7*01	88.9	Mo_IGHV2-6-7*01	77.8	H2	9	H2-9-1	10	VIWGDGITD	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV2-6-7*01	88.9	Mo_IGHV2-6-7*01	0.0	H3	7	H3-7-1	19	VTGLFDY	BBAALAB
H	heavy	Mus.musculus	Mo_IGHV2-6-7*01	88.9	Mo_IGHV2-6-7*01	100.0	H4	8	H4-8-1	9	KDNSKSQV	BBAAALBB
L	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	92.9	L1	14	L1-14-1	10	RSSTGAVTtSNYAS	BBAAEBBBAAALBB
L	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L2	8	L2-8-1	20	GGTNNRAP	BLEABBBB
L	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	87.5	L3	9	L3-9-4	11	ALWYSNHWV	BBBBLABBB
L	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L4	6	L4-6-*	-1	LIGDKA	BBLLBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024