PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1NGZ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV6-13*01	95.6	Mo_IGKV6-13*01	100.0	L1	11	L1-11-1	4	KASQNVGTAVA	BBABBAEABBB
A	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV6-13*01	95.6	Mo_IGKV6-13*01	100.0	L2	8	L2-8-1	6	YSASNRYT	BLLABBBB
A	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV6-13*01	95.6	Mo_IGKV6-13*01	100.0	L3	9	L3-9-cis7-1	7	QQYSSYPLT	BBAABBbBB
A	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV6-13*01	95.6	Mo_IGKV6-13*01	100.0	L4	6	L4-6-1	16	GSGTDF	EBEABB
B	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1-72*03	95.1	Mo_IGHV1-72*03	100.0	H1	13	H1-13-*	-1	KASGYTFTSYWMH	BBBLBBAABEBBB
B	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1-72*03	95.1	Mo_IGHV1-72*03	100.0	H2	10	H2-10-1	7	RIDPNSGGTK	BBBAAALBBB
B	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1-72*03	95.1	Mo_IGHV1-72*03	0.0	H3	7	H3-7-*	-1	TRRDSDY	BBABBAB
B	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1-72*03	95.1	Mo_IGHV1-72*03	100.0	H4	8	H4-8-1	8	VDKPSSTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024