PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1MH5

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV2-137*01	98.6	Mo_IGKV2-137*01	100.0	L1	16	L1-16-1	11	RSSKSLlhsngNTYLY	BBABBABBAALBBBBB
A	kappa	Mus.musculus	Mo_IGKV2-137*01	98.6	Mo_IGKV2-137*01	100.0	L2	8	L2-8-4	17	YRMSNLAS	BEAABBBB
A	kappa	Mus.musculus	Mo_IGKV2-137*01	98.6	Mo_IGKV2-137*01	85.7	L3	9	L3-9-cis7-1	7	LQHLEYPFT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV2-137*01	98.6	Mo_IGKV2-137*01	100.0	L4	6	L4-6-3	15	GSGTAF	EBAABB
B	heavy	Mus.musculus	Mo_IGHV1S61*01	98.6	Mo_IGHV1S61*01	92.3	H1	13	H1-13-1	11	KASGYTFTSNWIN	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV1S61*01	98.6	Mo_IGHV1S61*01	70.0	H2	10	H2-10-1	8	NIYPDSYRTN	BBBAAALBBB
B	heavy	Mus.musculus	Mo_IGHV1S61*01	98.6	Mo_IGHV1S61*01	50.0	H3	12	H3-12-*	-1	VRKHYSYDGVVY	BBBBAABAABBB
B	heavy	Mus.musculus	Mo_IGHV1S61*01	98.6	Mo_IGHV1S61*01	100.0	H4	8	H4-8-1	9	VDTSSSTA	BBAAALBB
H	heavy	Mus.musculus	Mo_IGHV1S61*01	98.6	Mo_IGHV1S61*01	92.3	H1	13	H1-13-1	10	KASGYTFTSNWIN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1S61*01	98.6	Mo_IGHV1S61*01	70.0	H2	10	H2-10-1	7	NIYPDSYRTN	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1S61*01	98.6	Mo_IGHV1S61*01	50.0	H3	12	H3-12-*	-1	VRKHYSYDGVVY	BBBBAABAABBB
H	heavy	Mus.musculus	Mo_IGHV1S61*01	98.6	Mo_IGHV1S61*01	100.0	H4	8	H4-8-1	9	VDTSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV2-137*01	98.6	Mo_IGKV2-137*01	100.0	L1	16	L1-16-1	9	RSSKSLlhsngNTYLY	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV2-137*01	98.6	Mo_IGKV2-137*01	100.0	L2	8	L2-8-4	14	YRMSNLAS	BEAABBBB
L	kappa	Mus.musculus	Mo_IGKV2-137*01	98.6	Mo_IGKV2-137*01	85.7	L3	9	L3-9-cis7-1	7	LQHLEYPFT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV2-137*01	98.6	Mo_IGKV2-137*01	100.0	L4	6	L4-6-3	17	GSGTAF	EBAABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024